RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 RWDD1Q9H446 243 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-218ENST00000530442 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
CAPN1-218ENST00000530442 ECM29Q5VYK3 1845 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 POTECB2RU33 542 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 ZBTB22O15209 634 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 NEFLP07196 543 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-218ENST00000530442 GMPSP49915 693 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-218ENST00000530442 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 CERS5Q8N5B7 392 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
CAPN1-218ENST00000530442 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
CAPN1-218ENST00000530442 CHAF1AQ13111 956 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-218ENST00000530442 SCARF1Q14162 830 aa13.48□□□□□ -0.25
CAPN1-218ENST00000530442 GMLQ99445 158 aa13.48□□□□□ -0.25
CAPN1-218ENST00000530442 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
CAPN1-218ENST00000530442 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 MYO3BQ8WXR4 1341 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 SEMA3EO15041 775 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 FRAT2O75474 233 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 RPS12P25398 132 aaKnown RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 MCAMP43121 646 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 FKBP1AP62942 108 aaKnown RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 PI16Q6UXB8 463 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
CAPN1-218ENST00000530442 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
CAPN1-218ENST00000530442 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.25
CAPN1-218ENST00000530442 EPS15P42566 896 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 GRIK5Q16478 980 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 DPF2Q92785 391 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 RRAGCQ9HB90 399 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 HMG20BQ9P0W2 317 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 DENND2AQ9ULE3 1009 aa13.46□□□□□ -0.25
CAPN1-218ENST00000530442 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 MYH7P12883 1935 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 IQCA1LA6NCM1 817 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 KIF3CO14782 793 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-218ENST00000530442 ANKRD45Q5TZF3 282 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 KIAA0825Q8IV33 1275 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-218ENST00000530442 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-218ENST00000530442 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-218ENST00000530442 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
CAPN1-218ENST00000530442 EGFRP00533 1210 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 EPHX2P34913 555 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 B4GALNT3Q6L9W6 998 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 SPATA5Q8NB90 893 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 TRPM4Q8TD43 1214 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
CAPN1-218ENST00000530442 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
CAPN1-218ENST00000530442 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-218ENST00000530442 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 VEGFAP15692 232 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-218ENST00000530442 PRDX5P30044 214 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 ZNF280AP59817 542 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-218ENST00000530442 NUCB1Q02818 461 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-218ENST00000530442 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 ADARB2Q9NS39 739 aaKnown RBP13.43□□□□□ -0.26
CAPN1-218ENST00000530442 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
CAPN1-218ENST00000530442 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
CAPN1-218ENST00000530442 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
CAPN1-218ENST00000530442 ZAP70P43403 619 aa13.42□□□□□ -0.26
CAPN1-218ENST00000530442 SAMD7Q7Z3H4 446 aa13.42□□□□□ -0.26
CAPN1-218ENST00000530442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-218ENST00000530442 H7C1D1 291 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-218ENST00000530442 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-218ENST00000530442 KIF4BQ2VIQ3 1234 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-218ENST00000530442 CHD1LQ86WJ1 897 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 MYOZ2Q9NPC6 264 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 ECHDC1Q9NTX5 307 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
CAPN1-218ENST00000530442 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
CAPN1-218ENST00000530442 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.26
CAPN1-218ENST00000530442 ATP5JP18859 108 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 MX1P20591 662 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-218ENST00000530442 TBC1D9Q6ZT07 1266 aa13.4□□□□□ -0.26
CAPN1-218ENST00000530442 USP50Q70EL3 339 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms