RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 KAZALD1Q96I82 304 aa26.33■■□□□ 1.81
SMPD1-204ENST00000530395 ZBED3Q96IU2 234 aaPredicted RBP26.33■■□□□ 1.81
SMPD1-204ENST00000530395 COL1A1P02452 1464 aaPredicted RBP26.33■■□□□ 1.81
SMPD1-204ENST00000530395 SLFN5Q08AF3 891 aa26.32■■□□□ 1.8
SMPD1-204ENST00000530395 UBE4AQ14139 1066 aa26.32■■□□□ 1.8
SMPD1-204ENST00000530395 SSH1Q8WYL5 1049 aa26.32■■□□□ 1.8
SMPD1-204ENST00000530395 MOB2Q70IA6 237 aa26.31■■□□□ 1.8
SMPD1-204ENST00000530395 MTMR14Q8NCE2 650 aa26.31■■□□□ 1.8
SMPD1-204ENST00000530395 BICC1Q9H694 974 aaKnown RBP26.31■■□□□ 1.8
SMPD1-204ENST00000530395 MROH5Q6ZUA9 1318 aa26.31■■□□□ 1.8
SMPD1-204ENST00000530395 ARAP2Q8WZ64 1704 aa26.31■■□□□ 1.8
SMPD1-204ENST00000530395 F8W031 263 aaPredicted RBP26.3■■□□□ 1.8
SMPD1-204ENST00000530395 UBE2Q2LH0YL09 131 aa26.3■■□□□ 1.8
SMPD1-204ENST00000530395 MYO1BO43795 1136 aa26.3■■□□□ 1.8
SMPD1-204ENST00000530395 RABL6Q3YEC7 729 aaPredicted RBP26.3■■□□□ 1.8
SMPD1-204ENST00000530395 CSRNP1Q96S65 589 aa26.3■■□□□ 1.8
SMPD1-204ENST00000530395 RNF186Q9NXI6 227 aa26.3■■□□□ 1.8
SMPD1-204ENST00000530395 TRPA1O75762 1119 aa26.29■■□□□ 1.8
SMPD1-204ENST00000530395 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
SMPD1-204ENST00000530395 ARMC9Q7Z3E5 817 aa26.28■■□□□ 1.8
SMPD1-204ENST00000530395 PUS3Q9BZE2 481 aaKnown RBP26.28■■□□□ 1.8
SMPD1-204ENST00000530395 JAG2Q9Y219 1238 aa26.28■■□□□ 1.8
SMPD1-204ENST00000530395 HIBADHP31937 336 aaKnown RBP26.27■■□□□ 1.8
SMPD1-204ENST00000530395 CFAP100Q494V2 611 aa26.27■■□□□ 1.8
SMPD1-204ENST00000530395 RIPOR2Q9Y4F9 1068 aa26.27■■□□□ 1.8
SMPD1-204ENST00000530395 FAM205AQ6ZU69 1335 aa26.27■■□□□ 1.8
SMPD1-204ENST00000530395 GYG1P46976 350 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 ANKRD44Q8N8A2 993 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 MCOLN1Q9GZU1 580 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 DEFB129Q9H1M3 183 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 SMC4Q9NTJ3 1288 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 PPP2R3BQ9Y5P8 575 aa26.26■■□□□ 1.79
SMPD1-204ENST00000530395 SPDYE2BA6NHP3 402 aa26.25■■□□□ 1.79
SMPD1-204ENST00000530395 CCDC85CA6NKD9 419 aa26.25■■□□□ 1.79
SMPD1-204ENST00000530395 SPDYE6P0CI01 402 aa26.25■■□□□ 1.79
SMPD1-204ENST00000530395 RBM5P52756 815 aaKnown RBP eCLIP26.25■■□□□ 1.79
SMPD1-204ENST00000530395 DGKZQ13574 1117 aa26.25■■□□□ 1.79
SMPD1-204ENST00000530395 TDRD7Q8NHU6 1098 aaKnown RBP26.25■■□□□ 1.79
SMPD1-204ENST00000530395 PRKG1Q13976 671 aa26.24■■□□□ 1.79
SMPD1-204ENST00000530395 METTL24Q5JXM2 366 aa26.24■■□□□ 1.79
SMPD1-204ENST00000530395 MFSD14BQ5SR56 506 aa26.24■■□□□ 1.79
SMPD1-204ENST00000530395 VPS37DQ86XT2 251 aa26.24■■□□□ 1.79
SMPD1-204ENST00000530395 CDCA7LQ96GN5 454 aa26.24■■□□□ 1.79
SMPD1-204ENST00000530395 FAM84BQ96KN1 310 aaPredicted RBP26.24■■□□□ 1.79
SMPD1-204ENST00000530395 USP44Q9H0E7 712 aa26.23■■□□□ 1.79
SMPD1-204ENST00000530395 CLRN2A0PK11 232 aa26.22■■□□□ 1.79
SMPD1-204ENST00000530395 CT47B1P0C2W7 299 aaPredicted RBP26.22■■□□□ 1.79
SMPD1-204ENST00000530395 PRMT6Q96LA8 375 aaPredicted RBP26.22■■□□□ 1.79
SMPD1-204ENST00000530395 VEZTQ9HBM0 779 aa26.22■■□□□ 1.79
SMPD1-204ENST00000530395 ANGEL1Q9UNK9 670 aaKnown RBP26.22■■□□□ 1.79
SMPD1-204ENST00000530395 PCDHAC2Q9Y5I4 1007 aa26.22■■□□□ 1.79
SMPD1-204ENST00000530395 PTPN12Q05209 780 aaKnown RBP26.21■■□□□ 1.79
SMPD1-204ENST00000530395 LRRC24Q50LG9 513 aa26.21■■□□□ 1.79
SMPD1-204ENST00000530395 CAVIN4Q5BKX8 364 aa26.21■■□□□ 1.79
SMPD1-204ENST00000530395 TTF2Q9UNY4 1162 aaKnown RBP26.21■■□□□ 1.79
SMPD1-204ENST00000530395 CCER2I3L3R5 266 aa26.2■■□□□ 1.78
SMPD1-204ENST00000530395 PPP1R12BO60237 982 aaPredicted RBP26.2■■□□□ 1.78
SMPD1-204ENST00000530395 SREBF2Q12772 1141 aa26.2■■□□□ 1.78
SMPD1-204ENST00000530395 SUPT20HL1Q3ZLR7 823 aa26.2■■□□□ 1.78
SMPD1-204ENST00000530395 TRMT2AQ8IZ69 625 aaKnown RBP26.2■■□□□ 1.78
SMPD1-204ENST00000530395 SERPINA10Q9UK55 444 aa26.2■■□□□ 1.78
SMPD1-204ENST00000530395 FRAT2O75474 233 aaPredicted RBP26.19■■□□□ 1.78
SMPD1-204ENST00000530395 PDE8BO95263 885 aa26.19■■□□□ 1.78
SMPD1-204ENST00000530395 LDLRAD1Q5T700 205 aa26.19■■□□□ 1.78
SMPD1-204ENST00000530395 MKRN3Q13064 507 aaKnown RBP26.18■■□□□ 1.78
SMPD1-204ENST00000530395 TNFAIP1Q13829 316 aa26.18■■□□□ 1.78
SMPD1-204ENST00000530395 FBXO33Q7Z6M2 555 aa26.18■■□□□ 1.78
SMPD1-204ENST00000530395 VGLL2Q8N8G2 317 aa26.18■■□□□ 1.78
SMPD1-204ENST00000530395 MYH13Q9UKX3 1938 aa26.18■■□□□ 1.78
SMPD1-204ENST00000530395 SSC5DA1L4H1 1573 aa26.17■■□□□ 1.78
SMPD1-204ENST00000530395 TM4SF4P48230 202 aa26.17■■□□□ 1.78
SMPD1-204ENST00000530395 KLHDC4Q8TBB5 520 aa26.17■■□□□ 1.78
SMPD1-204ENST00000530395 TBC1D22AQ8WUA7 517 aa26.17■■□□□ 1.78
SMPD1-204ENST00000530395 CHAF1AQ13111 956 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-204ENST00000530395 PUM3Q15397 648 aaKnown RBP26.16■■□□□ 1.78
SMPD1-204ENST00000530395 MAP3K11Q16584 847 aa26.16■■□□□ 1.78
SMPD1-204ENST00000530395 IQSEC3Q9UPP2 1182 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-204ENST00000530395 RASA3Q14644 834 aa26.15■■□□□ 1.78
SMPD1-204ENST00000530395 SPDYE2Q495Y8 402 aa26.15■■□□□ 1.78
SMPD1-204ENST00000530395 SLC10A4Q96EP9 437 aa26.15■■□□□ 1.78
SMPD1-204ENST00000530395 FZD1Q9UP38 647 aa26.15■■□□□ 1.78
SMPD1-204ENST00000530395 AOX1Q06278 1338 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 KIF16BQ96L93 1317 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 UNCXA6NJT0 531 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 IFIT1P09914 478 aaKnown RBP26.14■■□□□ 1.78
SMPD1-204ENST00000530395 UBTFL1P0CB47 393 aaPredicted RBP26.14■■□□□ 1.78
SMPD1-204ENST00000530395 CRKP46108 304 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 SPRYD7Q5W111 196 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 API5Q9BZZ5 524 aaKnown RBP26.14■■□□□ 1.78
SMPD1-204ENST00000530395 ZNF70Q9UC06 446 aaPredicted RBP26.14■■□□□ 1.78
SMPD1-204ENST00000530395 LAMB1P07942 1786 aa26.14■■□□□ 1.78
SMPD1-204ENST00000530395 EYA2O00167 538 aa26.13■■□□□ 1.77
SMPD1-204ENST00000530395 IREB2P48200 963 aaKnown RBP26.13■■□□□ 1.77
SMPD1-204ENST00000530395 NBPF12Q5TAG4 269 aaPredicted RBP26.13■■□□□ 1.77
SMPD1-204ENST00000530395 CTU1Q7Z7A3 348 aaKnown RBP26.13■■□□□ 1.77
SMPD1-204ENST00000530395 DZIP1LQ8IYY4 767 aaKnown RBP26.13■■□□□ 1.77
SMPD1-204ENST00000530395 NOB1Q9ULX3 412 aaKnown RBP26.13■■□□□ 1.77
SMPD1-204ENST00000530395 HDAC5Q9UQL6 1122 aa26.13■■□□□ 1.77
SMPD1-204ENST00000530395 TBC1D8O95759 1140 aa26.12■■□□□ 1.77
SMPD1-204ENST00000530395 TDRD3Q9H7E2 651 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms