RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 RNF34Q969K3 372 aa9.79□□□□□ -0.84
CASP4-208ENST00000530309 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
CASP4-208ENST00000530309 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
CASP4-208ENST00000530309 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
CASP4-208ENST00000530309 CLEC4MQ9H2X3 399 aaPredicted RBP9.78□□□□□ -0.84
CASP4-208ENST00000530309 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
CASP4-208ENST00000530309 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
CASP4-208ENST00000530309 ZNF385CQ66K41 422 aaPredicted RBP9.77□□□□□ -0.85
CASP4-208ENST00000530309 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
CASP4-208ENST00000530309 IL22RA1Q8N6P7 574 aa9.77□□□□□ -0.85
CASP4-208ENST00000530309 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
CASP4-208ENST00000530309 CEP44Q9C0F1 390 aa9.77□□□□□ -0.85
CASP4-208ENST00000530309 BAG6P46379 1132 aa9.76□□□□□ -0.85
CASP4-208ENST00000530309 CABP4P57796 275 aa9.76□□□□□ -0.85
CASP4-208ENST00000530309 METTL16Q86W50 562 aaKnown RBP9.76□□□□□ -0.85
CASP4-208ENST00000530309 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
CASP4-208ENST00000530309 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
CASP4-208ENST00000530309 FBXO24O75426 580 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 EPHA1P21709 976 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 PCDH1Q08174 1060 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 CCDC85BQ15834 202 aaPredicted RBP9.75□□□□□ -0.85
CASP4-208ENST00000530309 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 SV2BQ7L1I2 683 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 SVOPQ8N4V2 548 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 SEC31BQ9NQW1 1179 aa9.75□□□□□ -0.85
CASP4-208ENST00000530309 WIPF1O43516 503 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 IKBKEQ14164 716 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 ZNF423Q2M1K9 1284 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 WFDC8Q8IUA0 241 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 NEDD1Q8NHV4 660 aa9.74□□□□□ -0.85
CASP4-208ENST00000530309 H3BRJ5 948 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 B3GALT4O96024 378 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
CASP4-208ENST00000530309 DGKGP49619 791 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 MSL1Q68DK7 614 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 NT5DC4Q86YG4 428 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 NECAB3Q96P71 396 aaPredicted RBP9.73□□□□□ -0.85
CASP4-208ENST00000530309 TMEM39AQ9NV64 488 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 GPN3Q9UHW5 284 aaPredicted RBP9.73□□□□□ -0.85
CASP4-208ENST00000530309 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
CASP4-208ENST00000530309 NID1P14543 1247 aa9.72□□□□□ -0.85
CASP4-208ENST00000530309 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
CASP4-208ENST00000530309 CDC25BP30305 580 aa9.72□□□□□ -0.85
CASP4-208ENST00000530309 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
CASP4-208ENST00000530309 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
CASP4-208ENST00000530309 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
CASP4-208ENST00000530309 ENC1O14682 589 aa9.71□□□□□ -0.86
CASP4-208ENST00000530309 ARHGEF15O94989 841 aa9.71□□□□□ -0.86
CASP4-208ENST00000530309 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.86
CASP4-208ENST00000530309 ERMP1Q7Z2K6 904 aa9.71□□□□□ -0.86
CASP4-208ENST00000530309 LINC01387J3KSC0 135 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
CASP4-208ENST00000530309 CELA3AP09093 270 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 RLBP1P12271 317 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 ERCC5P28715 1186 aaPredicted RBP9.7□□□□□ -0.86
CASP4-208ENST00000530309 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
CASP4-208ENST00000530309 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 TXNDC11Q6PKC3 985 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 WNT8BQ93098 351 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
CASP4-208ENST00000530309 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
CASP4-208ENST00000530309 DMRTC2Q8IXT2 367 aaPredicted RBP9.69□□□□□ -0.86
CASP4-208ENST00000530309 DDX54Q8TDD1 881 aaKnown RBP9.69□□□□□ -0.86
CASP4-208ENST00000530309 TRIM56Q9BRZ2 755 aaKnown RBP9.69□□□□□ -0.86
CASP4-208ENST00000530309 SOX17Q9H6I2 414 aaPredicted RBP9.69□□□□□ -0.86
CASP4-208ENST00000530309 FSCN2O14926 492 aa9.68□□□□□ -0.86
CASP4-208ENST00000530309 ARL4DP49703 201 aa9.68□□□□□ -0.86
CASP4-208ENST00000530309 PWP1Q13610 501 aa9.68□□□□□ -0.86
CASP4-208ENST00000530309 SLC7A3Q8WY07 619 aa9.68□□□□□ -0.86
CASP4-208ENST00000530309 OSGEPQ9NPF4 335 aa9.68□□□□□ -0.86
CASP4-208ENST00000530309 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
CASP4-208ENST00000530309 PAGE1O75459 146 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 C19orf57Q0VDD7 668 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 MAP3K11Q16584 847 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 ZNF394Q53GI3 561 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 RELL1Q8IUW5 271 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 TGIF2Q9GZN2 237 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 SRA1Q9HD15 236 aaKnown RBP9.67□□□□□ -0.86
CASP4-208ENST00000530309 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 KBTBD4Q9NVX7 518 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 DDX41Q9UJV9 622 aaKnown RBP9.67□□□□□ -0.86
CASP4-208ENST00000530309 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
CASP4-208ENST00000530309 LIG3P49916 1009 aa9.66□□□□□ -0.86
CASP4-208ENST00000530309 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
CASP4-208ENST00000530309 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
CASP4-208ENST00000530309 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
CASP4-208ENST00000530309 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
CASP4-208ENST00000530309 LINC00114Q6XXX2 140 aa9.66□□□□□ -0.86
CASP4-208ENST00000530309 NME2P22392 152 aa9.65□□□□□ -0.86
CASP4-208ENST00000530309 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
CASP4-208ENST00000530309 GSTM4Q03013 218 aa9.65□□□□□ -0.86
CASP4-208ENST00000530309 SETDB1Q15047 1291 aa9.65□□□□□ -0.86
CASP4-208ENST00000530309 ZNF654Q8IZM8 581 aa9.65□□□□□ -0.86
CASP4-208ENST00000530309 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms