RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 CERS5Q8N5B7 392 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 ERO1AQ96HE7 468 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 MPHOSPH8Q99549 860 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 ANKRD2Q9GZV1 360 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 VEZTQ9HBM0 779 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 JAG2Q9Y219 1238 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 LAMB1P07942 1786 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 COL1A1P02452 1464 aaPredicted RBP14.51□□□□□ -0.09
SF3B2-208ENST00000529994 AOX1Q06278 1338 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 CAP1Q01518 475 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 CHRNDQ07001 517 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 CFAP100Q494V2 611 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 NBPF12Q5TAG4 269 aaPredicted RBP14.51□□□□□ -0.09
SF3B2-208ENST00000529994 G2E3Q7L622 706 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 HELBQ8NG08 1087 aaPredicted RBP14.51□□□□□ -0.09
SF3B2-208ENST00000529994 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 CD209Q9NNX6 404 aa14.51□□□□□ -0.09
SF3B2-208ENST00000529994 H7C1W4 665 aa14.5□□□□□ -0.09
SF3B2-208ENST00000529994 ANP32CO43423 234 aa14.5□□□□□ -0.09
SF3B2-208ENST00000529994 TAF5LO75529 589 aa14.5□□□□□ -0.09
SF3B2-208ENST00000529994 CALD1Q05682 793 aaKnown RBP14.5□□□□□ -0.09
SF3B2-208ENST00000529994 SUPT20HL1Q3ZLR7 823 aa14.5□□□□□ -0.09
SF3B2-208ENST00000529994 PRMT6Q96LA8 375 aaPredicted RBP14.5□□□□□ -0.09
SF3B2-208ENST00000529994 PTPN18Q99952 460 aa14.5□□□□□ -0.09
SF3B2-208ENST00000529994 OTOFQ9HC10 1997 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 CEP290O15078 2479 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 MYO1BO43795 1136 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 USP2O75604 605 aaPredicted RBP14.49□□□□□ -0.09
SF3B2-208ENST00000529994 RBM5P52756 815 aaKnown RBP eCLIP14.49□□□□□ -0.09
SF3B2-208ENST00000529994 SP3Q02447 781 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 OTUD7BQ6GQQ9 843 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 TSR2Q969E8 191 aaKnown RBP14.49□□□□□ -0.09
SF3B2-208ENST00000529994 ARMC5Q96C12 935 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 PPP2R3BQ9Y5P8 575 aa14.49□□□□□ -0.09
SF3B2-208ENST00000529994 A0A1B0GUL6 1792 aa14.48□□□□□ -0.09
SF3B2-208ENST00000529994 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
SF3B2-208ENST00000529994 MYCP01106 439 aaPredicted RBP14.48□□□□□ -0.09
SF3B2-208ENST00000529994 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
SF3B2-208ENST00000529994 IREB2P48200 963 aaKnown RBP14.48□□□□□ -0.09
SF3B2-208ENST00000529994 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.091e-8■■■□□ 18.3
SF3B2-208ENST00000529994 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
SF3B2-208ENST00000529994 ELP3Q9H9T3 547 aa14.48□□□□□ -0.09
SF3B2-208ENST00000529994 IRS2Q9Y4H2 1338 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 GCKRQ14397 625 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 RASA3Q14644 834 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 PLA2G12BQ9BX93 195 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 CHMP4AQ9BY43 222 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 MRS2Q9HD23 443 aa14.47□□□□□ -0.09
SF3B2-208ENST00000529994 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 CSF1RP07333 972 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 CASP7P55210 303 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 ANKRD13AQ8IZ07 590 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 OPTNQ96CV9 577 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 COLQQ9Y215 455 aaPredicted RBP14.46□□□□□ -0.09
SF3B2-208ENST00000529994 PTCH2Q9Y6C5 1203 aa14.46□□□□□ -0.09
SF3B2-208ENST00000529994 TRIOBPQ9H2D6 2365 aa14.46□□□□□ -0.1
SF3B2-208ENST00000529994 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 UNCXA6NJT0 531 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 PLIN1O60240 522 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 ZNF804AQ7Z570 1209 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 CDAN1Q8IWY9 1227 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 ZNF333Q96JL9 665 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 CHMP3Q9Y3E7 222 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 ZSWIM8A7E2V4 1837 aa14.45□□□□□ -0.1
SF3B2-208ENST00000529994 TESPA1A2RU30 521 aaPredicted RBP14.44□□□□□ -0.1
SF3B2-208ENST00000529994 IL1R1P14778 569 aa14.44□□□□□ -0.1
SF3B2-208ENST00000529994 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
SF3B2-208ENST00000529994 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
SF3B2-208ENST00000529994 SLC9C1Q4G0N8 1177 aa14.44□□□□□ -0.1
SF3B2-208ENST00000529994 MS4A4AQ96JQ5 239 aa14.44□□□□□ -0.1
SF3B2-208ENST00000529994 CCL15-CCL14A0A0B4J2E2 113 aa14.43□□□□□ -0.1
SF3B2-208ENST00000529994 CCL15Q16663 113 aa14.43□□□□□ -0.1
SF3B2-208ENST00000529994 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
SF3B2-208ENST00000529994 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
SF3B2-208ENST00000529994 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
SF3B2-208ENST00000529994 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
SF3B2-208ENST00000529994 TDRD3Q9H7E2 651 aaKnown RBP14.43□□□□□ -0.1
SF3B2-208ENST00000529994 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
SF3B2-208ENST00000529994 TCP10L2B9ZVM9 353 aa14.42□□□□□ -0.1
SF3B2-208ENST00000529994 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
SF3B2-208ENST00000529994 FLIIQ13045 1269 aa14.42□□□□□ -0.1
SF3B2-208ENST00000529994 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
SF3B2-208ENST00000529994 FKBP5Q13451 457 aaPredicted RBP14.42□□□□□ -0.1
SF3B2-208ENST00000529994 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.42□□□□□ -0.1
SF3B2-208ENST00000529994 NBPF11Q86T75 865 aa14.42□□□□□ -0.1
SF3B2-208ENST00000529994 DNAAF4Q8WXU2 420 aa14.42□□□□□ -0.1
SF3B2-208ENST00000529994 ZNF594Q96JF6 807 aaPredicted RBP14.42□□□□□ -0.1
SF3B2-208ENST00000529994 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 H0YGN5 161 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 FKBP1AP62942 108 aaKnown RBP14.41□□□□□ -0.1
SF3B2-208ENST00000529994 FOXO4P98177 505 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 VGLL4Q14135 290 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 LINS1Q8NG48 757 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms