RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 R3HDMLQ9H3Y0 253 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 XDHP47989 1333 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 G3V3G9 751 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 IGKV5-2P06315 115 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 DACT2Q5SW24 774 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 ZNF296Q8WUU4 475 aaPredicted RBP11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 FZD1Q9UP38 647 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 LAMB1P07942 1786 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 PITPNM2Q9BZ72 1349 aa11.02□□□□□ -0.65
TGFBR3-208ENST00000529608 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 WNT10BO00744 389 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 APAF1O14727 1248 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 KLRK1P26718 216 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 PODNQ7Z5L7 613 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 TSPYL6Q8N831 410 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 TTLL11Q8NHH1 800 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 GREM2Q9H772 168 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 MINPP1Q9UNW1 487 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
TGFBR3-208ENST00000529608 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 SASH1O94885 1247 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 CTSWP56202 376 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 FKBP1BP68106 108 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
TGFBR3-208ENST00000529608 IFT57Q9NWB7 429 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 MAP3K2Q9Y2U5 619 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 PDE4DIPQ5VU43 2346 aa11□□□□□ -0.65
TGFBR3-208ENST00000529608 TM4SF4P48230 202 aa10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 PRKG1Q13976 671 aa10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 G2E3Q7L622 706 aa10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
TGFBR3-208ENST00000529608 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 GPR25O00155 361 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 GNAI1P63096 354 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 ZBED3Q96IU2 234 aaPredicted RBP10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 BSDC1Q9NW68 430 aaPredicted RBP10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
TGFBR3-208ENST00000529608 SNAP23O00161 211 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 TTLL12Q14166 644 aaPredicted RBP10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 STRIP1Q5VSL9 837 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 KSR2Q6VAB6 950 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 KIAA0825Q8IV33 1275 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 AOX1Q06278 1338 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 IRS2Q9Y4H2 1338 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
TGFBR3-208ENST00000529608 NEURL1BA8MQ27 555 aa10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 H7C1W4 665 aa10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 CASP7P55210 303 aa10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 LDLRAD1Q5T700 205 aa10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 CERS5Q8N5B7 392 aa10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 TSR2Q969E8 191 aaKnown RBP10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 CDC5LQ99459 802 aaKnown RBP10.96□□□□□ -0.65
TGFBR3-208ENST00000529608 HTTP42858 3142 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 HSP90B1P14625 803 aaKnown RBP10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 GTF2IP78347 998 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 CAP1Q01518 475 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 CFHR5Q9BXR6 569 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 COA1Q9GZY4 146 aa10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 RBBP6Q7Z6E9 1792 aaKnown RBP10.95□□□□□ -0.66
TGFBR3-208ENST00000529608 ZNF804BA4D1E1 1349 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 MYO3BQ8WXR4 1341 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 ITGA6P23229 1130 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 PKN2Q16513 984 aaKnown RBP10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 CCDC184Q52MB2 194 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 TTLL5Q6EMB2 1281 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 FBXO46Q6PJ61 603 aaPredicted RBP10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
TGFBR3-208ENST00000529608 IGF2BP3O00425 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 FKTNO75072 461 aa10.93□□□□□ -0.66
TGFBR3-208ENST00000529608 TAF5LO75529 589 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms