RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 GJA3Q9Y6H8 435 aa17.21■□□□□ 0.35
CMTM1-212ENST00000529386 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
CMTM1-212ENST00000529386 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
CMTM1-212ENST00000529386 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
CMTM1-212ENST00000529386 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 ERC2O15083 957 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 VIL1P09327 827 aaKnown RBP17.2■□□□□ 0.34
CMTM1-212ENST00000529386 MMP14P50281 582 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 FKBP1AP62942 108 aaKnown RBP17.2■□□□□ 0.34
CMTM1-212ENST00000529386 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-212ENST00000529386 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
CMTM1-212ENST00000529386 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-212ENST00000529386 COL4A5P29400 1685 aa17.2■□□□□ 0.34
CMTM1-212ENST00000529386 PSMD14O00487 310 aa17.19■□□□□ 0.34
CMTM1-212ENST00000529386 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
CMTM1-212ENST00000529386 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
CMTM1-212ENST00000529386 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
CMTM1-212ENST00000529386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.19■□□□□ 0.34
CMTM1-212ENST00000529386 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
CMTM1-212ENST00000529386 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
CMTM1-212ENST00000529386 ATP5JP18859 108 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 MX1P20591 662 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
CMTM1-212ENST00000529386 RASGRF1Q13972 1273 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 SPTY2D1Q68D10 685 aaPredicted RBP17.18■□□□□ 0.34
CMTM1-212ENST00000529386 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 SUGT1Q9Y2Z0 365 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 PSME4Q14997 1843 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 SCN9AQ15858 1988 aa17.18■□□□□ 0.34
CMTM1-212ENST00000529386 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 IGSF3O75054 1194 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 DPF2Q92785 391 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
CMTM1-212ENST00000529386 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
CMTM1-212ENST00000529386 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
CMTM1-212ENST00000529386 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
CMTM1-212ENST00000529386 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
CMTM1-212ENST00000529386 MAST3O60307 1309 aa17.16■□□□□ 0.34
CMTM1-212ENST00000529386 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
CMTM1-212ENST00000529386 H7C1D1 291 aa17.15■□□□□ 0.34
CMTM1-212ENST00000529386 YY1P25490 414 aa17.15■□□□□ 0.34
CMTM1-212ENST00000529386 MCAMP43121 646 aa17.15■□□□□ 0.34
CMTM1-212ENST00000529386 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-212ENST00000529386 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-212ENST00000529386 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
CMTM1-212ENST00000529386 AOX1Q06278 1338 aa17.15■□□□□ 0.34
CMTM1-212ENST00000529386 LDHBP07195 334 aaKnown RBP17.14■□□□□ 0.33
CMTM1-212ENST00000529386 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
CMTM1-212ENST00000529386 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
CMTM1-212ENST00000529386 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
CMTM1-212ENST00000529386 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
CMTM1-212ENST00000529386 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
CMTM1-212ENST00000529386 PDE1AP54750 535 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 TMED8Q6PL24 325 aaPredicted RBP17.13■□□□□ 0.33
CMTM1-212ENST00000529386 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 DNAJC2Q99543 621 aaKnown RBP17.13■□□□□ 0.33
CMTM1-212ENST00000529386 HAUS7Q99871 368 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
CMTM1-212ENST00000529386 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
CMTM1-212ENST00000529386 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
CMTM1-212ENST00000529386 SCARF1Q14162 830 aa17.12■□□□□ 0.33
CMTM1-212ENST00000529386 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
CMTM1-212ENST00000529386 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
CMTM1-212ENST00000529386 GMLQ99445 158 aa17.12■□□□□ 0.33
CMTM1-212ENST00000529386 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
CMTM1-212ENST00000529386 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
CMTM1-212ENST00000529386 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 ZAP70P43403 619 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 GSTO1P78417 241 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
CMTM1-212ENST00000529386 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
CMTM1-212ENST00000529386 OSBPL3Q9H4L5 887 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
CMTM1-212ENST00000529386 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 TTF2Q9UNY4 1162 aaKnown RBP17.11■□□□□ 0.33
CMTM1-212ENST00000529386 SCN4AP35499 1836 aa17.11■□□□□ 0.33
CMTM1-212ENST00000529386 GOLIM4O00461 696 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-212ENST00000529386 SCNN1DP51172 638 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-212ENST00000529386 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 ZNF526Q8TF50 670 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-212ENST00000529386 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
CMTM1-212ENST00000529386 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
CMTM1-212ENST00000529386 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms