RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 PPP4R2Q9NY27 417 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 MKL2Q9ULH7 1088 aa8.42□□□□□ -1.06
NUP98-216ENST00000529379 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 CDC25BP30305 580 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 GSTT1P30711 240 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 PTPN12Q05209 780 aaKnown RBP8.41□□□□□ -1.06
NUP98-216ENST00000529379 TXNDC11Q6PKC3 985 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 KIAA1522Q9P206 1035 aaPredicted RBP8.41□□□□□ -1.06
NUP98-216ENST00000529379 VTI1BQ9UEU0 232 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
NUP98-216ENST00000529379 GNB5O14775 395 aa8.4□□□□□ -1.06
NUP98-216ENST00000529379 PLVAPQ9BX97 442 aa8.4□□□□□ -1.06
NUP98-216ENST00000529379 AKAP2Q9Y2D5 859 aa8.4□□□□□ -1.06
NUP98-216ENST00000529379 FAM177BA6PVY3 158 aa8.39□□□□□ -1.07
NUP98-216ENST00000529379 H3BRJ5 948 aa8.39□□□□□ -1.07
NUP98-216ENST00000529379 XRCC5P13010 732 aaKnown RBP8.39□□□□□ -1.07
NUP98-216ENST00000529379 RASSF7Q02833 373 aa8.39□□□□□ -1.07
NUP98-216ENST00000529379 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
NUP98-216ENST00000529379 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
NUP98-216ENST00000529379 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
NUP98-216ENST00000529379 ESRRAP11474 423 aaPredicted RBP8.38□□□□□ -1.07
NUP98-216ENST00000529379 CABP4P57796 275 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 PCDH1Q08174 1060 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 ZNF423Q2M1K9 1284 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
NUP98-216ENST00000529379 BEND7Q8N7W2 519 aaPredicted RBP8.38□□□□□ -1.07
NUP98-216ENST00000529379 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 TM4SF5O14894 197 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 DEAF1O75398 565 aaPredicted RBP8.37□□□□□ -1.07
NUP98-216ENST00000529379 VAMP1P23763 118 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 IKBKEQ14164 716 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 SETDB1Q15047 1291 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 MEI1Q5TIA1 1274 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
NUP98-216ENST00000529379 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 PIK3R2O00459 728 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 FSCN2O14926 492 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 RECKO95980 971 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 RPS26P11Q5JNZ5 115 aaPredicted RBP8.36□□□□□ -1.07
NUP98-216ENST00000529379 GALNT11Q8NCW6 608 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 SLC7A3Q8WY07 619 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 SCARF2Q96GP6 870 aaPredicted RBP8.36□□□□□ -1.07
NUP98-216ENST00000529379 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
NUP98-216ENST00000529379 FBXO24O75426 580 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 B3GALT4O96024 378 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 ITGAEP38570 1179 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
NUP98-216ENST00000529379 FAM117BQ6P1L5 589 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 FMR1NBQ8N0W7 255 aaPredicted RBP8.35□□□□□ -1.07
NUP98-216ENST00000529379 ZFYVE1Q9HBF4 777 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 PPM1HQ9ULR3 514 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
NUP98-216ENST00000529379 COL8A1P27658 744 aa8.34□□□□□ -1.07
NUP98-216ENST00000529379 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
NUP98-216ENST00000529379 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
NUP98-216ENST00000529379 DTWD1Q8N5C7 304 aa8.34□□□□□ -1.07
NUP98-216ENST00000529379 ANKRD24Q8TF21 1146 aa8.34□□□□□ -1.07
NUP98-216ENST00000529379 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
NUP98-216ENST00000529379 SPDYE3A6NKU9 549 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 GDF11O95390 407 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 ITGB2P05107 769 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
NUP98-216ENST00000529379 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
NUP98-216ENST00000529379 FBXO11Q86XK2 927 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 WNT8BQ93098 351 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 OSGEPQ9NPF4 335 aa8.33□□□□□ -1.08
NUP98-216ENST00000529379 NOP53Q9NZM5 478 aaKnown RBP8.33□□□□□ -1.08
NUP98-216ENST00000529379 GPN3Q9UHW5 284 aaPredicted RBP8.33□□□□□ -1.08
NUP98-216ENST00000529379 ST13P50502 369 aaKnown RBP8.32□□□□□ -1.08
NUP98-216ENST00000529379 RAC1P63000 192 aa8.32□□□□□ -1.08
NUP98-216ENST00000529379 C19orf57Q0VDD7 668 aa8.32□□□□□ -1.08
NUP98-216ENST00000529379 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
NUP98-216ENST00000529379 TMEM151AQ8N4L1 468 aa8.32□□□□□ -1.08
NUP98-216ENST00000529379 KLHL23Q8NBE8 558 aa8.32□□□□□ -1.08
NUP98-216ENST00000529379 NECAB3Q96P71 396 aaPredicted RBP8.32□□□□□ -1.08
NUP98-216ENST00000529379 SOX17Q9H6I2 414 aaPredicted RBP8.32□□□□□ -1.08
NUP98-216ENST00000529379 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
NUP98-216ENST00000529379 RNF225M0QZC1 329 aaPredicted RBP8.31□□□□□ -1.08
NUP98-216ENST00000529379 DLL1O00548 723 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 ENC1O14682 589 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 DDX3YO15523 660 aaKnown RBP8.31□□□□□ -1.08
NUP98-216ENST00000529379 ARL4DP49703 201 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 GSTM4Q03013 218 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 FOXD4L6Q3SYB3 417 aaPredicted RBP8.31□□□□□ -1.08
NUP98-216ENST00000529379 FOXD4L3Q6VB84 417 aaPredicted RBP8.31□□□□□ -1.08
NUP98-216ENST00000529379 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
NUP98-216ENST00000529379 ADAM11O75078 769 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 CELA3AP09093 270 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 SUZ12Q15022 739 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms