RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
SSH3-206ENST00000529224 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
SSH3-206ENST00000529224 GBA2Q9HCG7 927 aaPredicted RBP16.37■□□□□ 0.21
SSH3-206ENST00000529224 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
SSH3-206ENST00000529224 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
SSH3-206ENST00000529224 FKBP1AP62942 108 aaKnown RBP16.36■□□□□ 0.21
SSH3-206ENST00000529224 KIAA0825Q8IV33 1275 aa16.36■□□□□ 0.21
SSH3-206ENST00000529224 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
SSH3-206ENST00000529224 BCAR3O75815 825 aa16.35■□□□□ 0.21
SSH3-206ENST00000529224 GNAI3P08754 354 aa16.35■□□□□ 0.21
SSH3-206ENST00000529224 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
SSH3-206ENST00000529224 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
SSH3-206ENST00000529224 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
SSH3-206ENST00000529224 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
SSH3-206ENST00000529224 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
SSH3-206ENST00000529224 CDCA5Q96FF9 252 aa16.35■□□□□ 0.21
SSH3-206ENST00000529224 CCDC85CA6NKD9 419 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 EYA2O00167 538 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 SASH1O94885 1247 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 PDE8BO95263 885 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 TRIM27P14373 513 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 GYG1P46976 350 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 NOGQ13253 232 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 RGMBQ6NW40 437 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 C2orf69Q8N8R5 385 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 TDRD7Q8NHU6 1098 aaKnown RBP16.34■□□□□ 0.21
SSH3-206ENST00000529224 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
SSH3-206ENST00000529224 MEIS3Q99687 375 aa16.34■□□□□ 0.21
SSH3-206ENST00000529224 SCAF8Q9UPN6 1271 aaKnown RBP16.34■□□□□ 0.21
SSH3-206ENST00000529224 LRRFIP2Q9Y608 721 aaKnown RBP16.34■□□□□ 0.21
SSH3-206ENST00000529224 WNT10BO00744 389 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 PTPN12Q05209 780 aaKnown RBP16.33■□□□□ 0.2
SSH3-206ENST00000529224 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 CERS5Q8N5B7 392 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 FAM205AQ6ZU69 1335 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
SSH3-206ENST00000529224 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
SSH3-206ENST00000529224 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
SSH3-206ENST00000529224 PAPPA2Q9BXP8 1791 aa16.32■□□□□ 0.2
SSH3-206ENST00000529224 CA12O43570 354 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 CIAO1O76071 339 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
SSH3-206ENST00000529224 DLGAP5Q15398 846 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 MTMR14Q8NCE2 650 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 JAG2Q9Y219 1238 aa16.31■□□□□ 0.2
SSH3-206ENST00000529224 SLC5A1P13866 664 aa16.3■□□□□ 0.2
SSH3-206ENST00000529224 FGFR2P21802 821 aa16.3■□□□□ 0.2
SSH3-206ENST00000529224 ZNF157P51786 506 aaPredicted RBP16.3■□□□□ 0.2
SSH3-206ENST00000529224 MFSD14BQ5SR56 506 aa16.3■□□□□ 0.2
SSH3-206ENST00000529224 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
SSH3-206ENST00000529224 CLUAP1Q96AJ1 413 aa16.3■□□□□ 0.2
SSH3-206ENST00000529224 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
SSH3-206ENST00000529224 SIL1Q9H173 461 aa16.3■□□□□ 0.2
SSH3-206ENST00000529224 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
SSH3-206ENST00000529224 FRAT2O75474 233 aaPredicted RBP16.29■□□□□ 0.2
SSH3-206ENST00000529224 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
SSH3-206ENST00000529224 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 LPIN2Q92539 896 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 CCDC102AQ96A19 550 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
SSH3-206ENST00000529224 GNAI2P04899 355 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 SLC10A3P09131 477 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 IL15P40933 162 aaPredicted RBP16.28■□□□□ 0.2
SSH3-206ENST00000529224 FKBP1BP68106 108 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
SSH3-206ENST00000529224 MYO1BO43795 1136 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 NF2P35240 595 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 BCAMP50895 628 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
SSH3-206ENST00000529224 MTX1Q13505 466 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 FTSJ3Q8IY81 847 aaKnown RBP16.27■□□□□ 0.2
SSH3-206ENST00000529224 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
SSH3-206ENST00000529224 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.2
SSH3-206ENST00000529224 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
SSH3-206ENST00000529224 PA2G4Q9UQ80 394 aaKnown RBP16.27■□□□□ 0.2
SSH3-206ENST00000529224 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.19
SSH3-206ENST00000529224 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 RBM5P52756 815 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSH3-206ENST00000529224 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
SSH3-206ENST00000529224 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
SSH3-206ENST00000529224 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
SSH3-206ENST00000529224 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
SSH3-206ENST00000529224 CSRNP1Q96S65 589 aa16.25■□□□□ 0.19
SSH3-206ENST00000529224 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
SSH3-206ENST00000529224 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms