RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 UBTFL1P0CB47 393 aaPredicted RBP17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 HSPA8P11142 646 aaKnown RBP17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 GYG1P46976 350 aa17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
CHRDL2-205ENST00000528471 F8W031 263 aaPredicted RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 ZNF157P51786 506 aaPredicted RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 FKBP1AP62942 108 aaKnown RBP17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 DLGAP5Q15398 846 aa17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
CHRDL2-205ENST00000528471 NF2P35240 595 aa17.4■□□□□ 0.38
CHRDL2-205ENST00000528471 FKBP1BP68106 108 aa17.4■□□□□ 0.38
CHRDL2-205ENST00000528471 MIER1Q8N108 512 aa17.4■□□□□ 0.38
CHRDL2-205ENST00000528471 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
CHRDL2-205ENST00000528471 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.38
CHRDL2-205ENST00000528471 FAM205AQ6ZU69 1335 aa17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 CA12O43570 354 aa17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 CAPN15O75808 1086 aa17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 HDAC5Q9UQL6 1122 aa17.39■□□□□ 0.37
CHRDL2-205ENST00000528471 COL1A1P02452 1464 aaPredicted RBP17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 MYO1BO43795 1136 aa17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 FRAT2O75474 233 aaPredicted RBP17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 PDE8BO95263 885 aa17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 MFSD14BQ5SR56 506 aa17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 PRAMEF18Q5VWM3 479 aa17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
CHRDL2-205ENST00000528471 FAM155AB1AL88 458 aaPredicted RBP17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 RBM5P52756 815 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 CFAP100Q494V2 611 aa17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 MTMR14Q8NCE2 650 aa17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 TSKSQ9UJT2 592 aa17.37■□□□□ 0.37
CHRDL2-205ENST00000528471 EYA2O00167 538 aa17.36■□□□□ 0.37
CHRDL2-205ENST00000528471 SLC10A3P09131 477 aa17.36■□□□□ 0.37
CHRDL2-205ENST00000528471 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
CHRDL2-205ENST00000528471 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
CHRDL2-205ENST00000528471 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
CHRDL2-205ENST00000528471 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 SIL1Q9H173 461 aa17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
CHRDL2-205ENST00000528471 CLRN2A0PK11 232 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 SLC5A1P13866 664 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 KIF23Q02241 960 aaPredicted RBP17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 RASAL3Q86YV0 1011 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 MEIS3Q99687 375 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 VEZTQ9HBM0 779 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
CHRDL2-205ENST00000528471 INTS3Q68E01 1043 aaKnown RBP17.33■□□□□ 0.36
CHRDL2-205ENST00000528471 ARMC9Q7Z3E5 817 aa17.33■□□□□ 0.36
CHRDL2-205ENST00000528471 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
CHRDL2-205ENST00000528471 DEFB129Q9H1M3 183 aa17.33■□□□□ 0.36
CHRDL2-205ENST00000528471 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.36
CHRDL2-205ENST00000528471 GNAI3P08754 354 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 BCAMP50895 628 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 PRKG1Q13976 671 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 LPIN2Q92539 896 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 PRMT6Q96LA8 375 aaPredicted RBP17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 SERPINA10Q9UK55 444 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
CHRDL2-205ENST00000528471 BCAR3O75815 825 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 CIAO1O76071 339 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 TRIM27P14373 513 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 FGFR2P21802 821 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 CEP126Q9P2H0 1117 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
CHRDL2-205ENST00000528471 CRKP46108 304 aa17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 ANGEL1Q9UNK9 670 aaKnown RBP17.3■□□□□ 0.36
CHRDL2-205ENST00000528471 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
CHRDL2-205ENST00000528471 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
CHRDL2-205ENST00000528471 PA2G4Q9UQ80 394 aaKnown RBP17.29■□□□□ 0.36
CHRDL2-205ENST00000528471 MAST3O60307 1309 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms