RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	TMEM57	Q8N5G2	664 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	ZBED3	Q96IU2	234 aa	Predicted RBP	14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	SIL1	Q9H173	461 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	PA2G4	Q9UQ80	394 aa	Known RBP	14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362		A0A1B0GUL6	1792 aa		14.68	□□□□□ -0.06
PSMC3-205	ENST00000528362	PITPNM2	Q9BZ72	1349 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	PSME4	Q14997	1843 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	HSPA1A	P0DMV8	641 aa	Known RBP	14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	HSPA1B	P0DMV9	641 aa	Known RBP	14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	RLBP1	P12271	317 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	MTX1	Q13505	466 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	FBXO3	Q9UK99	471 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	HDAC9	Q9UKV0	1011 aa		14.67	□□□□□ -0.06
PSMC3-205	ENST00000528362	ZNF646	O15015	1829 aa	Predicted RBP	14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362		F8W031	263 aa	Predicted RBP	14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	BCAM	P50895	628 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	CAVIN4	Q5BKX8	364 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	CYP4F22	Q6NT55	531 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	VPS37D	Q86XT2	251 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	CDCA5	Q96FF9	252 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	CAPNS2	Q96L46	248 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	COPRS	Q9NQ92	184 aa		14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	SCAF8	Q9UPN6	1271 aa	Known RBP	14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	WDR33	Q9C0J8	1336 aa	Known RBP	14.66	□□□□□ -0.06
PSMC3-205	ENST00000528362	SRGAP3	O43295	1099 aa		14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	GNAI2	P04899	355 aa		14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	IFIT1	P09914	478 aa	Known RBP	14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	MFSD14B	Q5SR56	506 aa		14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	LPIN2	Q92539	896 aa		14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	GBA2	Q9HCG7	927 aa	Predicted RBP	14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	PCDHAC2	Q9Y5I4	1007 aa		14.65	□□□□□ -0.06
PSMC3-205	ENST00000528362	SLC5A1	P13866	664 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	IL15	P40933	162 aa	Predicted RBP	14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	DLGAP5	Q15398	846 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	FTSJ3	Q8IY81	847 aa	Known RBP	14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	DZIP1L	Q8IYY4	767 aa	Known RBP	14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	MTMR14	Q8NCE2	650 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	HHIPL1	Q96JK4	782 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	CEP126	Q9P2H0	1117 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	AOX1	Q06278	1338 aa		14.64	□□□□□ -0.07
PSMC3-205	ENST00000528362	PNMA6E	A0A0J9YXQ4	647 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	SPDYE2B	A6NHP3	402 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	SPDYE6	P0CI01	402 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	ECE1	P42892	770 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	HUNK	P57058	714 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	CHAF1A	Q13111	956 aa	Predicted RBP	14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	GRM1	Q13255	1194 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	GRIK5	Q16478	980 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	ATP2B3	Q16720	1220 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	CFAP100	Q494V2	611 aa		14.63	□□□□□ -0.07
PSMC3-205	ENST00000528362	PRAMEF18	Q5VWM3	479 aa		14.62	□□□□□ -0.07
PSMC3-205	ENST00000528362	ITPRIP	Q8IWB1	547 aa		14.62	□□□□□ -0.07
PSMC3-205	ENST00000528362	C2orf69	Q8N8R5	385 aa		14.62	□□□□□ -0.07
PSMC3-205	ENST00000528362	WBP1L	Q9NX94	342 aa		14.62	□□□□□ -0.07
PSMC3-205	ENST00000528362	AOC2	O75106	756 aa		14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	FRAT2	O75474	233 aa	Predicted RBP	14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	APOBEC3F	Q8IUX4	373 aa	Known RBP	14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	TNS4	Q8IZW8	715 aa		14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	PRMT6	Q96LA8	375 aa	Predicted RBP	14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	TTF2	Q9UNY4	1162 aa	Known RBP	14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	COL1A1	P02452	1464 aa	Predicted RBP	14.61	□□□□□ -0.07
PSMC3-205	ENST00000528362	CLRN2	A0PK11	232 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	ZBTB7B	O15156	539 aa	Predicted RBP	14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	FOXN1	O15353	648 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	ADORA1	P30542	326 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	PANK1	Q8TE04	598 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	TBC1D22A	Q8WUA7	517 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	C1orf115	Q9H7X2	142 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	SERPINA10	Q9UK55	444 aa		14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	14.6	□□□□□ -0.07
PSMC3-205	ENST00000528362	PHKA1	P46020	1223 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	RBM5	P52756	815 aa	Known RBP eCLIP	14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	FKBP1B	P68106	108 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	MAP2K1	Q02750	393 aa	Predicted RBP	14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	TFCP2	Q12800	502 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	POLA2	Q14181	598 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	RGMB	Q6NW40	437 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	DEFB129	Q9H1M3	183 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	TRPM7	Q96QT4	1865 aa		14.59	□□□□□ -0.07
PSMC3-205	ENST00000528362	FAM155A	B1AL88	458 aa	Predicted RBP	14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	MYO1B	O43795	1136 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	MAP2K2	P36507	400 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	CRK	P46108	304 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	MOB2	Q70IA6	237 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	AIDA	Q96BJ3	306 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	ZIC5	Q96T25	663 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	RCAN3	Q9UKA8	241 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362	THSD7B	Q9C0I4	1608 aa		14.58	□□□□□ -0.08
PSMC3-205	ENST00000528362		A0A1B0GUL7	405 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	TIMM10	P62072	90 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	ATP8B2	P98198	1209 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	NOG	Q13253	232 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	SPDYE2	Q495Y8	402 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	CCDC102B	Q68D86	513 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	WDR66	Q8TBY9	1149 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	SSH3	Q8TE77	659 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	VEZT	Q9HBM0	779 aa		14.57	□□□□□ -0.08
PSMC3-205	ENST00000528362	ZNF70	Q9UC06	446 aa	Predicted RBP	14.57	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms