RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
CAPN1-212ENST00000527887 USP44Q9H0E7 712 aa17.83■□□□□ 0.44
CAPN1-212ENST00000527887 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
CAPN1-212ENST00000527887 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
CAPN1-212ENST00000527887 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
CAPN1-212ENST00000527887 MYO1BO43795 1136 aa17.82■□□□□ 0.44
CAPN1-212ENST00000527887 CAPN15O75808 1086 aa17.82■□□□□ 0.44
CAPN1-212ENST00000527887 KIF23Q02241 960 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-212ENST00000527887 TDRD7Q8NHU6 1098 aaKnown RBP17.82■□□□□ 0.44
CAPN1-212ENST00000527887 CERS5Q8N5B7 392 aa17.81■□□□□ 0.44
CAPN1-212ENST00000527887 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
CAPN1-212ENST00000527887 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-212ENST00000527887 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
CAPN1-212ENST00000527887 PPP2R3BQ9Y5P8 575 aa17.81■□□□□ 0.44
CAPN1-212ENST00000527887 CAVIN4Q5BKX8 364 aa17.8■□□□□ 0.44
CAPN1-212ENST00000527887 ARMC9Q7Z3E5 817 aa17.8■□□□□ 0.44
CAPN1-212ENST00000527887 ZIC5Q96T25 663 aa17.8■□□□□ 0.44
CAPN1-212ENST00000527887 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
CAPN1-212ENST00000527887 POLR2AP24928 1970 aaKnown RBP17.8■□□□□ 0.44
CAPN1-212ENST00000527887 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-212ENST00000527887 PDE8BO95263 885 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 VPS37DQ86XT2 251 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 RASAL3Q86YV0 1011 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 PAPPA2Q9BXP8 1791 aa17.79■□□□□ 0.44
CAPN1-212ENST00000527887 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 UNCXA6NJT0 531 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 TTLL12Q14166 644 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-212ENST00000527887 PRAMEF18Q5VWM3 479 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 FBXO33Q7Z6M2 555 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 TBC1D22AQ8WUA7 517 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 CSRNP1Q96S65 589 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 SERPINA10Q9UK55 444 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
CAPN1-212ENST00000527887 UBE2Q2LH0YL09 131 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 GYG1P46976 350 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 SUPT20HL1Q3ZLR7 823 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 VGLL2Q8N8G2 317 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 TSKSQ9UJT2 592 aa17.77■□□□□ 0.44
CAPN1-212ENST00000527887 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
CAPN1-212ENST00000527887 SCAF8Q9UPN6 1271 aaKnown RBP17.77■□□□□ 0.44
CAPN1-212ENST00000527887 F8W031 263 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-212ENST00000527887 ABHD8Q96I13 439 aa17.76■□□□□ 0.43
CAPN1-212ENST00000527887 PRMT6Q96LA8 375 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-212ENST00000527887 RNF186Q9NXI6 227 aa17.76■□□□□ 0.43
CAPN1-212ENST00000527887 ZNF646O15015 1829 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-212ENST00000527887 EYA2O00167 538 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 PPP1R12BO60237 982 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 IFIT1P09914 478 aaKnown RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 UBTFL1P0CB47 393 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 PUM3Q15397 648 aaKnown RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 MAP3K11Q16584 847 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 MOB2Q70IA6 237 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 MRIQ9BWK5 157 aa17.75■□□□□ 0.43
CAPN1-212ENST00000527887 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
CAPN1-212ENST00000527887 TRPA1O75762 1119 aa17.74■□□□□ 0.43
CAPN1-212ENST00000527887 TM4SF4P48230 202 aa17.74■□□□□ 0.43
CAPN1-212ENST00000527887 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
CAPN1-212ENST00000527887 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
CAPN1-212ENST00000527887 SUGT1Q9Y2Z0 365 aa17.74■□□□□ 0.43
CAPN1-212ENST00000527887 FGFR2P21802 821 aa17.73■□□□□ 0.43
CAPN1-212ENST00000527887 PTPN12Q05209 780 aaKnown RBP17.73■□□□□ 0.43
CAPN1-212ENST00000527887 LPIN2Q92539 896 aa17.73■□□□□ 0.43
CAPN1-212ENST00000527887 JAG2Q9Y219 1238 aa17.73■□□□□ 0.43
CAPN1-212ENST00000527887 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
CAPN1-212ENST00000527887 CIAO1O76071 339 aa17.72■□□□□ 0.43
CAPN1-212ENST00000527887 INHBEP58166 350 aa17.72■□□□□ 0.43
CAPN1-212ENST00000527887 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
CAPN1-212ENST00000527887 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
CAPN1-212ENST00000527887 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
CAPN1-212ENST00000527887 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
CAPN1-212ENST00000527887 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
CAPN1-212ENST00000527887 CLRN2A0PK11 232 aa17.71■□□□□ 0.43
CAPN1-212ENST00000527887 SLC5A1P13866 664 aa17.71■□□□□ 0.43
CAPN1-212ENST00000527887 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
CAPN1-212ENST00000527887 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
CAPN1-212ENST00000527887 GNAI3P08754 354 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 CRKP46108 304 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 TNNI2P48788 182 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 BCAMP50895 628 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 RASA3Q14644 834 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 NOM1Q5C9Z4 860 aaKnown RBP17.7■□□□□ 0.42
CAPN1-212ENST00000527887 INTS3Q68E01 1043 aaKnown RBP17.7■□□□□ 0.42
CAPN1-212ENST00000527887 SLC10A4Q96EP9 437 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 MCOLN1Q9GZU1 580 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 CEP126Q9P2H0 1117 aa17.7■□□□□ 0.42
CAPN1-212ENST00000527887 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-212ENST00000527887 PCDHAC2Q9Y5I4 1007 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms