RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 CASP8Q14790 479 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 PPLO60437 1756 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 MAP2K7O14733 419 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 BEND6Q5SZJ8 279 aaPredicted RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 EDC3Q96F86 508 aaKnown RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 A0A087WUV0 522 aaPredicted RBP14.34□□□□□ -0.11
TSKU-203ENST00000527881 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 PNKPQ96T60 521 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 GBP3Q9H0R5 595 aa14.34□□□□□ -0.11
TSKU-203ENST00000527881 USP8P40818 1118 aa14.33□□□□□ -0.11
TSKU-203ENST00000527881 TDO2P48775 406 aa14.33□□□□□ -0.11
TSKU-203ENST00000527881 ZNF569Q5MCW4 686 aa14.33□□□□□ -0.11
TSKU-203ENST00000527881 CEP112Q8N8E3 955 aa14.33□□□□□ -0.11
TSKU-203ENST00000527881 MARCKSP29966 332 aaPredicted RBP14.33□□□□□ -0.12
TSKU-203ENST00000527881 FCHSD1Q86WN1 690 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 FAM212AQ96EL1 285 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 FANCLQ9NW38 375 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 SPTLC2O15270 562 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 EIF5P55010 431 aaKnown RBP14.33□□□□□ -0.12
TSKU-203ENST00000527881 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 VSTM4Q8IW00 320 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 FAM107BQ9H098 131 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 CLIC4Q9Y696 253 aa14.33□□□□□ -0.12
TSKU-203ENST00000527881 CUTAO60888 179 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 RNF40O75150 1001 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 CCDC175P0C221 793 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 CCT5P48643 541 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 NCAPHQ15003 741 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
TSKU-203ENST00000527881 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 NUDT16Q96DE0 195 aaKnown RBP14.32□□□□□ -0.12
TSKU-203ENST00000527881 CRB1P82279 1406 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 ABCA9Q8IUA7 1624 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
TSKU-203ENST00000527881 POGZQ7Z3K3 1410 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 CTAGE15A4D2H0 777 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 EBAG9O00559 213 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 CTAGE8P0CG41 777 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 BRD2P25440 801 aaKnown RBP14.31□□□□□ -0.12
TSKU-203ENST00000527881 VSNL1P62760 191 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 FBXW10Q5XX13 1052 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 CTAGE6Q86UF2 777 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 CTAGE4Q8IX94 777 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 KCNG4Q8TDN1 519 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
TSKU-203ENST00000527881 BPIFA3Q9BQP9 254 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 MTF1Q14872 753 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
TSKU-203ENST00000527881 GIMAP7Q8NHV1 300 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 NDUFB9Q9Y6M9 179 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
TSKU-203ENST00000527881 SYKP43405 635 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 L1RE1Q9UN81 338 aa14.31□□□□□ -0.12
TSKU-203ENST00000527881 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 SUGP1Q8IWZ8 645 aaKnown RBP14.3□□□□□ -0.12
TSKU-203ENST00000527881 TLR7Q9NYK1 1049 aaKnown RBP14.3□□□□□ -0.12
TSKU-203ENST00000527881 CDC23Q9UJX2 597 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 IKBKBO14920 756 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 PFKFB1P16118 471 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 PTPRMP28827 1452 aa14.3□□□□□ -0.12
TSKU-203ENST00000527881 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 CTAGE9A4FU28 777 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 STX10O60499 249 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 AMPHP49418 695 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 PNOCQ13519 176 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 KIFC2Q96AC6 838 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 MROH1Q8NDA8 1641 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 TAF5LO75529 589 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 RPS6KA5O75582 802 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 RDXP35241 583 aaKnown RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 LLPHQ9BRT6 129 aaKnown RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 CRACR2AQ9BSW2 395 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
TSKU-203ENST00000527881 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
TSKU-203ENST00000527881 A0A1W2PQ27 194 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms