RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 KLHDC4Q8TBB5 520 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 MCOLN1Q9GZU1 580 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 RIPOR2Q9Y4F9 1068 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 WNT10BO00744 389 aa24.16■■□□□ 1.46
CAPN1-211ENST00000527739 UBTFL1P0CB47 393 aaPredicted RBP24.16■■□□□ 1.46
CAPN1-211ENST00000527739 IL1R1P14778 569 aa24.16■■□□□ 1.46
CAPN1-211ENST00000527739 GYG1P46976 350 aa24.16■■□□□ 1.46
CAPN1-211ENST00000527739 HIBADHP31937 336 aaKnown RBP24.15■■□□□ 1.46
CAPN1-211ENST00000527739 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
CAPN1-211ENST00000527739 PRAMEF18Q5VWM3 479 aa24.15■■□□□ 1.46
CAPN1-211ENST00000527739 RGMBQ6NW40 437 aa24.15■■□□□ 1.46
CAPN1-211ENST00000527739 MMP14P50281 582 aa24.14■■□□□ 1.45
CAPN1-211ENST00000527739 VPS37DQ86XT2 251 aa24.14■■□□□ 1.45
CAPN1-211ENST00000527739 CERS5Q8N5B7 392 aa24.14■■□□□ 1.45
CAPN1-211ENST00000527739 PITPNM2Q9BZ72 1349 aa24.13■■□□□ 1.45
CAPN1-211ENST00000527739 ZNF157P51786 506 aaPredicted RBP24.13■■□□□ 1.45
CAPN1-211ENST00000527739 DLGAP5Q15398 846 aa24.13■■□□□ 1.45
CAPN1-211ENST00000527739 FAM84BQ96KN1 310 aaPredicted RBP24.13■■□□□ 1.45
CAPN1-211ENST00000527739 FRAT2O75474 233 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-211ENST00000527739 RBM5P52756 815 aaKnown RBP eCLIP24.11■■□□□ 1.45
CAPN1-211ENST00000527739 KIF23Q02241 960 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-211ENST00000527739 TTLL12Q14166 644 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-211ENST00000527739 FRAT1Q92837 279 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-211ENST00000527739 KIF16BQ96L93 1317 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 PDE8BO95263 885 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 DGKZQ13574 1117 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 CAVIN4Q5BKX8 364 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 TDRD7Q8NHU6 1098 aaKnown RBP24.1■■□□□ 1.45
CAPN1-211ENST00000527739 IQSEC3Q9UPP2 1182 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-211ENST00000527739 HDAC5Q9UQL6 1122 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 PSME4Q14997 1843 aa24.1■■□□□ 1.45
CAPN1-211ENST00000527739 IPO8O15397 1037 aaKnown RBP24.09■■□□□ 1.45
CAPN1-211ENST00000527739 CFAP100Q494V2 611 aa24.09■■□□□ 1.45
CAPN1-211ENST00000527739 CCDC102AQ96A19 550 aa24.09■■□□□ 1.45
CAPN1-211ENST00000527739 NF2P35240 595 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 RGS19P49795 217 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 FKBP1AP62942 108 aaKnown RBP24.08■■□□□ 1.45
CAPN1-211ENST00000527739 CHAF1AQ13111 956 aaPredicted RBP24.08■■□□□ 1.45
CAPN1-211ENST00000527739 MFSD14BQ5SR56 506 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 MOB2Q70IA6 237 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 APOBEC3FQ8IUX4 373 aaKnown RBP24.08■■□□□ 1.45
CAPN1-211ENST00000527739 ARHGAP45Q92619 1136 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 SIL1Q9H173 461 aa24.08■■□□□ 1.45
CAPN1-211ENST00000527739 LRRFIP2Q9Y608 721 aaKnown RBP24.08■■□□□ 1.45
CAPN1-211ENST00000527739 EYA2O00167 538 aa24.07■■□□□ 1.44
CAPN1-211ENST00000527739 BCAR3O75815 825 aa24.07■■□□□ 1.44
CAPN1-211ENST00000527739 PCDHAC2Q9Y5I4 1007 aa24.07■■□□□ 1.44
CAPN1-211ENST00000527739 FAM205AQ6ZU69 1335 aa24.07■■□□□ 1.44
CAPN1-211ENST00000527739 UBE2Q2LH0YL09 131 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 MYO1BO43795 1136 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 SLC10A3P09131 477 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 IFIT1P09914 478 aaKnown RBP24.06■■□□□ 1.44
CAPN1-211ENST00000527739 RFX5P48382 616 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-211ENST00000527739 FKBP1BP68106 108 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 MLLT1Q03111 559 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-211ENST00000527739 PTPN12Q05209 780 aaKnown RBP24.06■■□□□ 1.44
CAPN1-211ENST00000527739 PRKG1Q13976 671 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 FBXO33Q7Z6M2 555 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 ZBED3Q96IU2 234 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-211ENST00000527739 MEIS3Q99687 375 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 RNF186Q9NXI6 227 aa24.06■■□□□ 1.44
CAPN1-211ENST00000527739 CLRN2A0PK11 232 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 TRPA1O75762 1119 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 BCAMP50895 628 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 PUM3Q15397 648 aaKnown RBP24.05■■□□□ 1.44
CAPN1-211ENST00000527739 VGLL2Q8N8G2 317 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 CSRNP1Q96S65 589 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 VEZTQ9HBM0 779 aa24.05■■□□□ 1.44
CAPN1-211ENST00000527739 TTF2Q9UNY4 1162 aaKnown RBP24.05■■□□□ 1.44
CAPN1-211ENST00000527739 CLUAP1Q96AJ1 413 aa24.04■■□□□ 1.44
CAPN1-211ENST00000527739 PRMT6Q96LA8 375 aaPredicted RBP24.04■■□□□ 1.44
CAPN1-211ENST00000527739 ZNF646O15015 1829 aaPredicted RBP24.03■■□□□ 1.44
CAPN1-211ENST00000527739 SLC5A1P13866 664 aa24.03■■□□□ 1.44
CAPN1-211ENST00000527739 INTS3Q68E01 1043 aaKnown RBP24.03■■□□□ 1.44
CAPN1-211ENST00000527739 RASAL3Q86YV0 1011 aa24.03■■□□□ 1.44
CAPN1-211ENST00000527739 MTMR14Q8NCE2 650 aa24.03■■□□□ 1.44
CAPN1-211ENST00000527739 DEFB129Q9H1M3 183 aa24.03■■□□□ 1.44
CAPN1-211ENST00000527739 SAGE1Q9NXZ1 904 aa24.03■■□□□ 1.44
CAPN1-211ENST00000527739 SPDYE2BA6NHP3 402 aa24.02■■□□□ 1.44
CAPN1-211ENST00000527739 GNAI3P08754 354 aa24.02■■□□□ 1.44
CAPN1-211ENST00000527739 SPDYE6P0CI01 402 aa24.02■■□□□ 1.44
CAPN1-211ENST00000527739 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.02■■□□□ 1.44
CAPN1-211ENST00000527739 CEP126Q9P2H0 1117 aa24.02■■□□□ 1.44
CAPN1-211ENST00000527739 TNNQ9UQP3 1299 aa24.02■■□□□ 1.44
CAPN1-211ENST00000527739 TRIM27P14373 513 aa24.01■■□□□ 1.43
CAPN1-211ENST00000527739 ATF7IPQ6VMQ6 1270 aa24.01■■□□□ 1.43
CAPN1-211ENST00000527739 ATG9AQ7Z3C6 839 aa24.01■■□□□ 1.43
CAPN1-211ENST00000527739 ARMC9Q7Z3E5 817 aa24.01■■□□□ 1.43
CAPN1-211ENST00000527739 LPIN2Q92539 896 aa24.01■■□□□ 1.43
CAPN1-211ENST00000527739 PA2G4Q9UQ80 394 aaKnown RBP24.01■■□□□ 1.43
CAPN1-211ENST00000527739 FGFR2P21802 821 aa24■■□□□ 1.43
CAPN1-211ENST00000527739 PAPPA2Q9BXP8 1791 aa23.99■■□□□ 1.43
CAPN1-211ENST00000527739 TBC1D22AQ8WUA7 517 aa23.99■■□□□ 1.43
CAPN1-211ENST00000527739 SERPINA10Q9UK55 444 aa23.99■■□□□ 1.43
CAPN1-211ENST00000527739 AKAP11Q9UKA4 1901 aa23.99■■□□□ 1.43
CAPN1-211ENST00000527739 A0A1B0GUL6 1792 aa23.98■■□□□ 1.43
CAPN1-211ENST00000527739 CIAO1O76071 339 aa23.98■■□□□ 1.43
CAPN1-211ENST00000527739 GRIK5Q16478 980 aa23.98■■□□□ 1.43
CAPN1-211ENST00000527739 ATP2B3Q16720 1220 aa23.98■■□□□ 1.43
CAPN1-211ENST00000527739 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms