RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ASTN2O75129 1339 aaPredicted RBP32.83■■■□□ 2.85
TSPAN4-217ENST00000527644 IFIT1P09914 478 aaKnown RBP32.83■■■□□ 2.85
TSPAN4-217ENST00000527644 FGFR2P21802 821 aa32.83■■■□□ 2.85
TSPAN4-217ENST00000527644 ANGEL2Q5VTE6 544 aaKnown RBP32.83■■■□□ 2.85
TSPAN4-217ENST00000527644 SULF1Q8IWU6 871 aa32.83■■■□□ 2.85
TSPAN4-217ENST00000527644 SRGAP3O43295 1099 aa32.82■■■□□ 2.84
TSPAN4-217ENST00000527644 PITPNM2Q9BZ72 1349 aa32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 IL15P40933 162 aaPredicted RBP32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 LPIN2Q92539 896 aa32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 ZNF408Q9H9D4 720 aa32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 CEP126Q9P2H0 1117 aa32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 PA2G4Q9UQ80 394 aaKnown RBP32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 TLL2Q9Y6L7 1015 aa32.81■■■□□ 2.84
TSPAN4-217ENST00000527644 ADM5C9JUS6 153 aa32.8■■■□□ 2.84
TSPAN4-217ENST00000527644 NBPF9Q3BBW0 867 aa32.8■■■□□ 2.84
TSPAN4-217ENST00000527644 JAG2Q9Y219 1238 aa32.8■■■□□ 2.84
TSPAN4-217ENST00000527644 WNT10BO00744 389 aa32.79■■■□□ 2.84
TSPAN4-217ENST00000527644 SLC5A1P13866 664 aa32.79■■■□□ 2.84
TSPAN4-217ENST00000527644 VEGFBP49765 207 aa32.79■■■□□ 2.84
TSPAN4-217ENST00000527644 RLBP1P12271 317 aa32.78■■■□□ 2.84
TSPAN4-217ENST00000527644 DLK2Q6UY11 383 aa32.78■■■□□ 2.84
TSPAN4-217ENST00000527644 BCAMP50895 628 aa32.77■■■□□ 2.84
TSPAN4-217ENST00000527644 ITPRIPQ8IWB1 547 aa32.77■■■□□ 2.84
TSPAN4-217ENST00000527644 MFSD14BQ5SR56 506 aa32.76■■■□□ 2.83
TSPAN4-217ENST00000527644 SAPCD2Q86UD0 394 aa32.76■■■□□ 2.83
TSPAN4-217ENST00000527644 ZBED3Q96IU2 234 aaPredicted RBP32.76■■■□□ 2.83
TSPAN4-217ENST00000527644 F8W031 263 aaPredicted RBP32.75■■■□□ 2.83
TSPAN4-217ENST00000527644 FRAT2O75474 233 aaPredicted RBP32.75■■■□□ 2.83
TSPAN4-217ENST00000527644 MTMR14Q8NCE2 650 aa32.75■■■□□ 2.83
TSPAN4-217ENST00000527644 PCNTO95613 3336 aa32.75■■■□□ 2.83
TSPAN4-217ENST00000527644 DLGAP5Q15398 846 aa32.74■■■□□ 2.83
TSPAN4-217ENST00000527644 ATP2B3Q16720 1220 aa32.74■■■□□ 2.83
TSPAN4-217ENST00000527644 IQSEC3Q9UPP2 1182 aaPredicted RBP32.74■■■□□ 2.83
TSPAN4-217ENST00000527644 ZBTB7BO15156 539 aaPredicted RBP32.73■■■□□ 2.83
TSPAN4-217ENST00000527644 MS4A1P11836 297 aa32.73■■■□□ 2.83
TSPAN4-217ENST00000527644 CDCA5Q96FF9 252 aa32.73■■■□□ 2.83
TSPAN4-217ENST00000527644 HHIPL1Q96JK4 782 aa32.73■■■□□ 2.83
TSPAN4-217ENST00000527644 TBC1D22AQ8WUA7 517 aa32.72■■■□□ 2.83
TSPAN4-217ENST00000527644 RCAN3Q9UKA8 241 aa32.72■■■□□ 2.83
TSPAN4-217ENST00000527644 WDR33Q9C0J8 1336 aaKnown RBP32.72■■■□□ 2.83
TSPAN4-217ENST00000527644 PNMA6EA0A0J9YXQ4 647 aa32.71■■■□□ 2.83
TSPAN4-217ENST00000527644 ECE1P42892 770 aa32.71■■■□□ 2.83
TSPAN4-217ENST00000527644 CHAF1AQ13111 956 aaPredicted RBP32.71■■■□□ 2.83
TSPAN4-217ENST00000527644 CFAP100Q494V2 611 aa32.71■■■□□ 2.83
TSPAN4-217ENST00000527644 PAXIP1Q6ZW49 1069 aaPredicted RBP32.7■■■□□ 2.83
TSPAN4-217ENST00000527644 C2orf69Q8N8R5 385 aa32.7■■■□□ 2.83
TSPAN4-217ENST00000527644 GBA2Q9HCG7 927 aaPredicted RBP32.7■■■□□ 2.83
TSPAN4-217ENST00000527644 PANK1Q8TE04 598 aa32.69■■■□□ 2.82
TSPAN4-217ENST00000527644 CAPNS2Q96L46 248 aa32.69■■■□□ 2.82
TSPAN4-217ENST00000527644 TTF2Q9UNY4 1162 aaKnown RBP32.69■■■□□ 2.82
TSPAN4-217ENST00000527644 ATP8B2P98198 1209 aa32.68■■■□□ 2.82
TSPAN4-217ENST00000527644 CYP4F22Q6NT55 531 aa32.68■■■□□ 2.82
TSPAN4-217ENST00000527644 APOBEC3FQ8IUX4 373 aaKnown RBP32.68■■■□□ 2.82
TSPAN4-217ENST00000527644 SCAF8Q9UPN6 1271 aaKnown RBP32.68■■■□□ 2.82
TSPAN4-217ENST00000527644 SPDYE2BA6NHP3 402 aa32.67■■■□□ 2.82
TSPAN4-217ENST00000527644 SPDYE6P0CI01 402 aa32.67■■■□□ 2.82
TSPAN4-217ENST00000527644 SERPINA10Q9UK55 444 aa32.67■■■□□ 2.82
TSPAN4-217ENST00000527644 AKAP2Q9Y2D5 859 aa32.67■■■□□ 2.82
TSPAN4-217ENST00000527644 MYO1BO43795 1136 aa32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 HSPA1AP0DMV8 641 aaKnown RBP32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 HSPA1BP0DMV9 641 aaKnown RBP32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 RBM5P52756 815 aaKnown RBP eCLIP32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 HUNKP57058 714 aa32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 PRMT6Q96LA8 375 aaPredicted RBP32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 GNL3LQ9NVN8 582 aaKnown RBP32.66■■■□□ 2.82
TSPAN4-217ENST00000527644 TFCP2Q12800 502 aa32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 G3BP1Q13283 466 aaKnown RBP eCLIP32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 POLA2Q14181 598 aa32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 C1orf115Q9H7X2 142 aa32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 PCDHAC2Q9Y5I4 1007 aa32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 ARAP2Q8WZ64 1704 aa32.65■■■□□ 2.82
TSPAN4-217ENST00000527644 SSH3Q8TE77 659 aa32.64■■■□□ 2.82
TSPAN4-217ENST00000527644 SUGT1Q9Y2Z0 365 aa32.64■■■□□ 2.82
TSPAN4-217ENST00000527644 TIMM10P62072 90 aa32.63■■■□□ 2.81
TSPAN4-217ENST00000527644 GRM1Q13255 1194 aa32.63■■■□□ 2.81
TSPAN4-217ENST00000527644 WDR66Q8TBY9 1149 aa32.63■■■□□ 2.81
TSPAN4-217ENST00000527644 FKBP1BP68106 108 aa32.62■■■□□ 2.81
TSPAN4-217ENST00000527644 HDLBPQ00341 1268 aaKnown RBP32.62■■■□□ 2.81
TSPAN4-217ENST00000527644 GRIK5Q16478 980 aa32.62■■■□□ 2.81
TSPAN4-217ENST00000527644 A0A1B0GUL7 405 aa32.61■■■□□ 2.81
TSPAN4-217ENST00000527644 SEMA3EO15041 775 aa32.61■■■□□ 2.81
TSPAN4-217ENST00000527644 ZBTB22O15209 634 aa32.61■■■□□ 2.81
TSPAN4-217ENST00000527644 PRAMEF18Q5VWM3 479 aa32.61■■■□□ 2.81
TSPAN4-217ENST00000527644 ADORA1P30542 326 aa32.6■■■□□ 2.81
TSPAN4-217ENST00000527644 PHKA1P46020 1223 aa32.6■■■□□ 2.81
TSPAN4-217ENST00000527644 CRKP46108 304 aa32.6■■■□□ 2.81
TSPAN4-217ENST00000527644 CCDC102BQ68D86 513 aa32.6■■■□□ 2.81
TSPAN4-217ENST00000527644 MRIQ9BWK5 157 aa32.6■■■□□ 2.81
TSPAN4-217ENST00000527644 ECM29Q5VYK3 1845 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 NF2P35240 595 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 MAP2K2P36507 400 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 MAP2K1Q02750 393 aaPredicted RBP32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 MVPQ14764 893 aaKnown RBP32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 RGMBQ6NW40 437 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 DEFB129Q9H1M3 183 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 DENND2AQ9ULE3 1009 aa32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 COL1A1P02452 1464 aaPredicted RBP32.59■■■□□ 2.81
TSPAN4-217ENST00000527644 MAST3O60307 1309 aa32.58■■■□□ 2.81
TSPAN4-217ENST00000527644 CLRN2A0PK11 232 aa32.58■■■□□ 2.81
TSPAN4-217ENST00000527644 XAGE2Q96GT9 111 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms