RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 VGLL2Q8N8G2 317 aa21.58■■□□□ 1.05
LTBP3-208ENST00000527339 DDX19BQ9UMR2 479 aa21.58■■□□□ 1.05
LTBP3-208ENST00000527339 PDE8BO95263 885 aa21.57■■□□□ 1.04
LTBP3-208ENST00000527339 ATG9AQ7Z3C6 839 aa21.57■■□□□ 1.04
LTBP3-208ENST00000527339 SIL1Q9H173 461 aa21.57■■□□□ 1.04
LTBP3-208ENST00000527339 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
LTBP3-208ENST00000527339 FAM155AB1AL88 458 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-208ENST00000527339 ADM5C9JUS6 153 aa21.56■■□□□ 1.04
LTBP3-208ENST00000527339 H7C1D1 291 aa21.56■■□□□ 1.04
LTBP3-208ENST00000527339 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
LTBP3-208ENST00000527339 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
LTBP3-208ENST00000527339 DPF2Q92785 391 aa21.56■■□□□ 1.04
LTBP3-208ENST00000527339 CHMP4BQ9H444 224 aaKnown RBP21.56■■□□□ 1.04
LTBP3-208ENST00000527339 PA2G4Q9UQ80 394 aaKnown RBP21.56■■□□□ 1.04
LTBP3-208ENST00000527339 ASTN2O75129 1339 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-208ENST00000527339 ZNF609O15014 1411 aa21.55■■□□□ 1.04
LTBP3-208ENST00000527339 PNMA6EA0A0J9YXQ4 647 aa21.55■■□□□ 1.04
LTBP3-208ENST00000527339 SLC34A2O95436 690 aa21.55■■□□□ 1.04
LTBP3-208ENST00000527339 RPS12P25398 132 aaKnown RBP21.55■■□□□ 1.04
LTBP3-208ENST00000527339 IL15P40933 162 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-208ENST00000527339 HUNKP57058 714 aa21.55■■□□□ 1.04
LTBP3-208ENST00000527339 C1orf115Q9H7X2 142 aa21.55■■□□□ 1.04
LTBP3-208ENST00000527339 USP17L3A6NCW0 530 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 USP17L4A6NCW7 530 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 CA12O43570 354 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 ATP8B2P98198 1209 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 MLLT1Q03111 559 aaPredicted RBP21.54■■□□□ 1.04
LTBP3-208ENST00000527339 PUM3Q15397 648 aaKnown RBP21.54■■□□□ 1.04
LTBP3-208ENST00000527339 RBM26Q5T8P6 1007 aaKnown RBP21.54■■□□□ 1.04
LTBP3-208ENST00000527339 C20orf194Q5TEA3 1177 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 USP17L1Q7RTZ2 530 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 CD209Q9NNX6 404 aa21.54■■□□□ 1.04
LTBP3-208ENST00000527339 KRT26Q7Z3Y9 468 aa21.53■■□□□ 1.04
LTBP3-208ENST00000527339 CEP126Q9P2H0 1117 aa21.53■■□□□ 1.04
LTBP3-208ENST00000527339 IL1R1P14778 569 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 FGFR2P21802 821 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 NOGQ13253 232 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 POLA2Q14181 598 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 STRIP1Q5VSL9 837 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 RSBN1LQ6PCB5 846 aaPredicted RBP21.52■■□□□ 1.04
LTBP3-208ENST00000527339 AGBL3Q8NEM8 1001 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 SSH3Q8TE77 659 aa21.52■■□□□ 1.04
LTBP3-208ENST00000527339 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
LTBP3-208ENST00000527339 RRP1P56182 461 aaKnown RBP21.51■■□□□ 1.03
LTBP3-208ENST00000527339 DGKZQ13574 1117 aa21.51■■□□□ 1.03
LTBP3-208ENST00000527339 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
LTBP3-208ENST00000527339 ARAP2Q8WZ64 1704 aa21.51■■□□□ 1.03
LTBP3-208ENST00000527339 MYH13Q9UKX3 1938 aa21.51■■□□□ 1.03
LTBP3-208ENST00000527339 SLC5A1P13866 664 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 HIBADHP31937 336 aaKnown RBP21.5■■□□□ 1.03
LTBP3-208ENST00000527339 GYG1P46976 350 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 CAVIN4Q5BKX8 364 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 DACT2Q5SW24 774 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 TTLL5Q6EMB2 1281 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 RGMBQ6NW40 437 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 CEP85Q6P2H3 762 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 LPIN2Q92539 896 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 FAM84BQ96KN1 310 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-208ENST00000527339 GBA2Q9HCG7 927 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-208ENST00000527339 MYO3BQ8WXR4 1341 aa21.5■■□□□ 1.03
LTBP3-208ENST00000527339 FBXW7Q969H0 707 aa21.49■■□□□ 1.03
LTBP3-208ENST00000527339 GMLQ99445 158 aa21.49■■□□□ 1.03
LTBP3-208ENST00000527339 GTF2IP78347 998 aa21.48■■□□□ 1.03
LTBP3-208ENST00000527339 KIF23Q02241 960 aaPredicted RBP21.48■■□□□ 1.03
LTBP3-208ENST00000527339 G3BP1Q13283 466 aaKnown RBP eCLIP21.48■■□□□ 1.03
LTBP3-208ENST00000527339 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
LTBP3-208ENST00000527339 FBXO33Q7Z6M2 555 aa21.48■■□□□ 1.03
LTBP3-208ENST00000527339 VPS37DQ86XT2 251 aa21.48■■□□□ 1.03
LTBP3-208ENST00000527339 KIF4BQ2VIQ3 1234 aa21.47■■□□□ 1.03
LTBP3-208ENST00000527339 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
LTBP3-208ENST00000527339 GGA3Q9NZ52 723 aa21.47■■□□□ 1.03
LTBP3-208ENST00000527339 PDE4DIPQ5VU43 2346 aa21.46■■□□□ 1.03
LTBP3-208ENST00000527339 SASH1O94885 1247 aa21.46■■□□□ 1.03
LTBP3-208ENST00000527339 RPAP2Q8IXW5 612 aaPredicted RBP21.46■■□□□ 1.03
LTBP3-208ENST00000527339 DCPSQ96C86 337 aaKnown RBP21.46■■□□□ 1.03
LTBP3-208ENST00000527339 ZNF157P51786 506 aaPredicted RBP21.45■■□□□ 1.02
LTBP3-208ENST00000527339 TFCP2Q12800 502 aa21.45■■□□□ 1.02
LTBP3-208ENST00000527339 C2orf69Q8N8R5 385 aa21.45■■□□□ 1.02
LTBP3-208ENST00000527339 RNF186Q9NXI6 227 aa21.45■■□□□ 1.02
LTBP3-208ENST00000527339 SCAF8Q9UPN6 1271 aaKnown RBP21.45■■□□□ 1.02
LTBP3-208ENST00000527339 AKAP2Q9Y2D5 859 aa21.45■■□□□ 1.02
LTBP3-208ENST00000527339 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
LTBP3-208ENST00000527339 FAM205AQ6ZU69 1335 aa21.45■■□□□ 1.02
LTBP3-208ENST00000527339 SURF6O75683 361 aaKnown RBP21.44■■□□□ 1.02
LTBP3-208ENST00000527339 USP17L8P0C7I0 530 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 MMP14P50281 582 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 BCAMP50895 628 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 ZNF280AP59817 542 aaPredicted RBP21.44■■□□□ 1.02
LTBP3-208ENST00000527339 FKBP1AP62942 108 aaKnown RBP21.44■■□□□ 1.02
LTBP3-208ENST00000527339 CDCA5Q96FF9 252 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 CSRNP1Q96S65 589 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 MXD3Q9BW11 206 aa21.44■■□□□ 1.02
LTBP3-208ENST00000527339 TRPA1O75762 1119 aa21.43■■□□□ 1.02
LTBP3-208ENST00000527339 SLC10A3P09131 477 aa21.43■■□□□ 1.02
LTBP3-208ENST00000527339 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
LTBP3-208ENST00000527339 HMMRO75330 724 aa21.42■■□□□ 1.02
LTBP3-208ENST00000527339 FRAT2O75474 233 aaPredicted RBP21.42■■□□□ 1.02
LTBP3-208ENST00000527339 SCARF1Q14162 830 aa21.42■■□□□ 1.02
LTBP3-208ENST00000527339 OGFOD1Q8N543 542 aa21.42■■□□□ 1.02
LTBP3-208ENST00000527339 CCDC102AQ96A19 550 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms