RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
SMCO4-204ENST00000527149 TTLL5Q6EMB2 1281 aa20.46■□□□□ 0.87
SMCO4-204ENST00000527149 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
SMCO4-204ENST00000527149 ZNF526Q8TF50 670 aaPredicted RBP20.46■□□□□ 0.87
SMCO4-204ENST00000527149 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
SMCO4-204ENST00000527149 NMRK2Q9NPI5 230 aa20.46■□□□□ 0.87
SMCO4-204ENST00000527149 JAG2Q9Y219 1238 aa20.46■□□□□ 0.87
SMCO4-204ENST00000527149 SEMA3EO15041 775 aa20.45■□□□□ 0.86
SMCO4-204ENST00000527149 SCARF1Q14162 830 aa20.45■□□□□ 0.86
SMCO4-204ENST00000527149 PDS5AQ29RF7 1337 aaKnown RBP20.45■□□□□ 0.86
SMCO4-204ENST00000527149 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
SMCO4-204ENST00000527149 SHTN1A0MZ66 631 aa20.44■□□□□ 0.86
SMCO4-204ENST00000527149 RPS12P25398 132 aaKnown RBP20.44■□□□□ 0.86
SMCO4-204ENST00000527149 FKBP1AP62942 108 aaKnown RBP20.44■□□□□ 0.86
SMCO4-204ENST00000527149 AGBL3Q8NEM8 1001 aa20.44■□□□□ 0.86
SMCO4-204ENST00000527149 DPF2Q92785 391 aa20.44■□□□□ 0.86
SMCO4-204ENST00000527149 ZNF512BQ96KM6 892 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-204ENST00000527149 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
SMCO4-204ENST00000527149 MCAMP43121 646 aa20.43■□□□□ 0.86
SMCO4-204ENST00000527149 PI16Q6UXB8 463 aa20.43■□□□□ 0.86
SMCO4-204ENST00000527149 GNL3LQ9NVN8 582 aaKnown RBP20.43■□□□□ 0.86
SMCO4-204ENST00000527149 MYO3BQ8WXR4 1341 aa20.43■□□□□ 0.86
SMCO4-204ENST00000527149 NEFLP07196 543 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-204ENST00000527149 GRIK5Q16478 980 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 GORABQ5T7V8 394 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 FBXW7Q969H0 707 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 GPBP1L1Q9HC44 474 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-204ENST00000527149 HMG20BQ9P0W2 317 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 SALL3Q9BXA9 1300 aa20.42■□□□□ 0.86
SMCO4-204ENST00000527149 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
SMCO4-204ENST00000527149 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-204ENST00000527149 MFSD14BQ5SR56 506 aa20.41■□□□□ 0.86
SMCO4-204ENST00000527149 DENND2AQ9ULE3 1009 aa20.41■□□□□ 0.86
SMCO4-204ENST00000527149 SALL1Q9NSC2 1324 aa20.41■□□□□ 0.86
SMCO4-204ENST00000527149 MYO5AQ9Y4I1 1855 aaKnown RBP20.41■□□□□ 0.86
SMCO4-204ENST00000527149 KIF3CO14782 793 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 FRAT2O75474 233 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-204ENST00000527149 IFIT2P09913 472 aaKnown RBP20.4■□□□□ 0.86
SMCO4-204ENST00000527149 EPS15P42566 896 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 CCDC158Q5M9N0 1113 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 MICALL2Q8IY33 904 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 OTUD7AQ8TE49 926 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-204ENST00000527149 TAF1DQ9H5J8 278 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-204ENST00000527149 RRAGCQ9HB90 399 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 HACL1Q9UJ83 578 aa20.4■□□□□ 0.86
SMCO4-204ENST00000527149 DOCK2Q92608 1830 aa20.39■□□□□ 0.86
SMCO4-204ENST00000527149 IQCA1LA6NCM1 817 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
SMCO4-204ENST00000527149 NUCB1Q02818 461 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 SPATA5Q8NB90 893 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 TBC1D22AQ8WUA7 517 aa20.39■□□□□ 0.85
SMCO4-204ENST00000527149 CNOT7Q9UIV1 285 aaKnown RBP20.39■□□□□ 0.85
SMCO4-204ENST00000527149 EGFRP00533 1210 aa20.38■□□□□ 0.85
SMCO4-204ENST00000527149 KIAA0825Q8IV33 1275 aa20.38■□□□□ 0.85
SMCO4-204ENST00000527149 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
SMCO4-204ENST00000527149 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
SMCO4-204ENST00000527149 MAST2Q6P0Q8 1798 aa20.38■□□□□ 0.85
SMCO4-204ENST00000527149 USP17L8P0C7I0 530 aa20.37■□□□□ 0.85
SMCO4-204ENST00000527149 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
SMCO4-204ENST00000527149 EPHX2P34913 555 aa20.37■□□□□ 0.85
SMCO4-204ENST00000527149 TRPM4Q8TD43 1214 aa20.37■□□□□ 0.85
SMCO4-204ENST00000527149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMCO4-204ENST00000527149 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
SMCO4-204ENST00000527149 ATP5JP18859 108 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 PRDX5P30044 214 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 LNPKQ9C0E8 428 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 ADARB2Q9NS39 739 aaKnown RBP20.36■□□□□ 0.85
SMCO4-204ENST00000527149 SUGT1Q9Y2Z0 365 aa20.36■□□□□ 0.85
SMCO4-204ENST00000527149 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
SMCO4-204ENST00000527149 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
SMCO4-204ENST00000527149 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
SMCO4-204ENST00000527149 ZBED3Q96IU2 234 aaPredicted RBP20.35■□□□□ 0.85
SMCO4-204ENST00000527149 NDUFB9Q9Y6M9 179 aa20.35■□□□□ 0.85
SMCO4-204ENST00000527149 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
SMCO4-204ENST00000527149 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 ZAP70P43403 619 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
SMCO4-204ENST00000527149 TSHZ3Q63HK5 1081 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
SMCO4-204ENST00000527149 F8W031 263 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-204ENST00000527149 H7C1D1 291 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 MX1P20591 662 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 MMP14P50281 582 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 TBC1D10BQ4KMP7 808 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-204ENST00000527149 TBC1D9Q6ZT07 1266 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 PI4K2BQ8TCG2 481 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 MYOZ2Q9NPC6 264 aa20.33■□□□□ 0.85
SMCO4-204ENST00000527149 TTF2Q9UNY4 1162 aaKnown RBP20.33■□□□□ 0.85
SMCO4-204ENST00000527149 MYH2Q9UKX2 1941 aa20.33■□□□□ 0.84
SMCO4-204ENST00000527149 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
SMCO4-204ENST00000527149 KIF4BQ2VIQ3 1234 aa20.32■□□□□ 0.84
SMCO4-204ENST00000527149 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms