RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
NEDD8-205ENST00000527046 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
NEDD8-205ENST00000527046 SCNN1DP51172 638 aa13.24□□□□□ -0.29
NEDD8-205ENST00000527046 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
NEDD8-205ENST00000527046 GPC2Q8N158 579 aa13.24□□□□□ -0.29
NEDD8-205ENST00000527046 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-205ENST00000527046 WDR90Q96KV7 1748 aa13.23□□□□□ -0.29
NEDD8-205ENST00000527046 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
NEDD8-205ENST00000527046 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-205ENST00000527046 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
NEDD8-205ENST00000527046 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
NEDD8-205ENST00000527046 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
NEDD8-205ENST00000527046 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
NEDD8-205ENST00000527046 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
NEDD8-205ENST00000527046 SEMA3EO15041 775 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 EGFRP00533 1210 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 NEFLP07196 543 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 ATP5JP18859 108 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 EPS15P42566 896 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-205ENST00000527046 FKBP1AP62942 108 aaKnown RBP13.22□□□□□ -0.29
NEDD8-205ENST00000527046 TSHZ3Q63HK5 1081 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 SKAP1Q86WV1 359 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
NEDD8-205ENST00000527046 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
NEDD8-205ENST00000527046 SALL1Q9NSC2 1324 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 G3V3G9 751 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
NEDD8-205ENST00000527046 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.29
NEDD8-205ENST00000527046 TNIP1Q15025 636 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 SPATA5Q8NB90 893 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 AGBL3Q8NEM8 1001 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
NEDD8-205ENST00000527046 DPF2Q92785 391 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
NEDD8-205ENST00000527046 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
NEDD8-205ENST00000527046 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 ZAP70P43403 619 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 HIRAP54198 1017 aaPredicted RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 PDE1AP54750 535 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 ZNF280AP59817 542 aaPredicted RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 VPS37DQ86XT2 251 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 ZBED3Q96IU2 234 aaPredicted RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 RRAGCQ9HB90 399 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
NEDD8-205ENST00000527046 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
NEDD8-205ENST00000527046 AOX1Q06278 1338 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 YY1P25490 414 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 PRDX5P30044 214 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-205ENST00000527046 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
NEDD8-205ENST00000527046 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
NEDD8-205ENST00000527046 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
NEDD8-205ENST00000527046 SCN4AP35499 1836 aa13.18□□□□□ -0.3
NEDD8-205ENST00000527046 MX1P20591 662 aa13.18□□□□□ -0.3
NEDD8-205ENST00000527046 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
NEDD8-205ENST00000527046 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
NEDD8-205ENST00000527046 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-205ENST00000527046 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
NEDD8-205ENST00000527046 HAUS7Q99871 368 aa13.18□□□□□ -0.3
NEDD8-205ENST00000527046 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 KIF3CO14782 793 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 CHGBP05060 677 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 SAMD7Q7Z3H4 446 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-205ENST00000527046 MRIQ9BWK5 157 aa13.17□□□□□ -0.3
NEDD8-205ENST00000527046 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-205ENST00000527046 MYO3BQ8WXR4 1341 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 TRPM4Q8TD43 1214 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 TBC1D22AQ8WUA7 517 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
NEDD8-205ENST00000527046 PRMT6Q96LA8 375 aaPredicted RBP13.16□□□□□ -0.3
NEDD8-205ENST00000527046 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms