RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 HELBQ8NG08 1087 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-206ENST00000526966 F6X3S4 739 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 GPR25O00155 361 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 FKBP1AP62942 108 aaKnown RBP23.84■■□□□ 1.41
CAPN1-206ENST00000526966 PRKG1Q13976 671 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 MAP3K11Q16584 847 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 SPRYD7Q5W111 196 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 DEFB129Q9H1M3 183 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 ANGEL1Q9UNK9 670 aaKnown RBP23.84■■□□□ 1.41
CAPN1-206ENST00000526966 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
CAPN1-206ENST00000526966 ZNF804AQ7Z570 1209 aa23.83■■□□□ 1.41
CAPN1-206ENST00000526966 PPP2R3BQ9Y5P8 575 aa23.83■■□□□ 1.41
CAPN1-206ENST00000526966 EPHA10Q5JZY3 1008 aa23.82■■□□□ 1.4
CAPN1-206ENST00000526966 PCDHAC2Q9Y5I4 1007 aa23.82■■□□□ 1.4
CAPN1-206ENST00000526966 LMBR1LQ6UX01 489 aa23.81■■□□□ 1.4
CAPN1-206ENST00000526966 FZD1Q9UP38 647 aa23.81■■□□□ 1.4
CAPN1-206ENST00000526966 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
CAPN1-206ENST00000526966 HTTP42858 3142 aa23.81■■□□□ 1.4
CAPN1-206ENST00000526966 OTOFQ9HC10 1997 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 SPDYE2BA6NHP3 402 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 GRM8O00222 908 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 SPDYE6P0CI01 402 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 CFAP100Q494V2 611 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 R3HDMLQ9H3Y0 253 aa23.8■■□□□ 1.4
CAPN1-206ENST00000526966 SPINK5Q9NQ38 1064 aaPredicted RBP23.8■■□□□ 1.4
CAPN1-206ENST00000526966 CCDC57Q2TAC2 916 aa23.79■■□□□ 1.4
CAPN1-206ENST00000526966 SALL2Q9Y467 1007 aaPredicted RBP23.79■■□□□ 1.4
CAPN1-206ENST00000526966 MANSC4A6NHS7 340 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 UNCXA6NJT0 531 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 F8W031 263 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 MYO1BO43795 1136 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 FKTNO75072 461 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 ALDH1A1P00352 501 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 ZBTB48P10074 688 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 FBXO46Q6PJ61 603 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 LDHAL6AQ6ZMR3 332 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 ZNF594Q96JF6 807 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 PRMT6Q96LA8 375 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-206ENST00000526966 AOX1Q06278 1338 aa23.78■■□□□ 1.4
CAPN1-206ENST00000526966 PPP1R12BO60237 982 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-206ENST00000526966 INHBEP58166 350 aa23.77■■□□□ 1.4
CAPN1-206ENST00000526966 FAM205AQ6ZU69 1335 aa23.77■■□□□ 1.4
CAPN1-206ENST00000526966 CLRN2A0PK11 232 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 ALDH1L1O75891 902 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 SLC10A4Q96EP9 437 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 WNK4Q96J92 1243 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 CLMNQ96JQ2 1002 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 CNNM1Q9NRU3 951 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 JAG2Q9Y219 1238 aa23.76■■□□□ 1.39
CAPN1-206ENST00000526966 SUPT20HL1Q3ZLR7 823 aa23.75■■□□□ 1.39
CAPN1-206ENST00000526966 TAF7LQ5H9L4 462 aa23.75■■□□□ 1.39
CAPN1-206ENST00000526966 IFNL1Q8IU54 200 aa23.75■■□□□ 1.39
CAPN1-206ENST00000526966 NBPF12Q5TAG4 269 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-206ENST00000526966 TDRD7Q8NHU6 1098 aaKnown RBP23.74■■□□□ 1.39
CAPN1-206ENST00000526966 VEZTQ9HBM0 779 aa23.74■■□□□ 1.39
CAPN1-206ENST00000526966 C9orf78Q9NZ63 289 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-206ENST00000526966 IGF2BP3O00425 579 aaKnown RBP eCLIP23.73■■□□□ 1.39
CAPN1-206ENST00000526966 PLIN1O60240 522 aa23.73■■□□□ 1.39
CAPN1-206ENST00000526966 UBE4AQ14139 1066 aa23.73■■□□□ 1.39
CAPN1-206ENST00000526966 ANP32CO43423 234 aa23.72■■□□□ 1.39
CAPN1-206ENST00000526966 RASA3Q14644 834 aa23.72■■□□□ 1.39
CAPN1-206ENST00000526966 KAZALD1Q96I82 304 aa23.72■■□□□ 1.39
CAPN1-206ENST00000526966 SRCIN1Q9C0H9 1055 aa23.72■■□□□ 1.39
CAPN1-206ENST00000526966 USP2O75604 605 aaPredicted RBP23.71■■□□□ 1.39
CAPN1-206ENST00000526966 IREB2P48200 963 aaKnown RBP23.71■■□□□ 1.39
CAPN1-206ENST00000526966 SPDYE2Q495Y8 402 aa23.71■■□□□ 1.39
CAPN1-206ENST00000526966 MFSD14BQ5SR56 506 aa23.71■■□□□ 1.39
CAPN1-206ENST00000526966 PRPF38BQ5VTL8 546 aaKnown RBP23.71■■□□□ 1.39
CAPN1-206ENST00000526966 SUCLG2Q96I99 432 aa23.71■■□□□ 1.39
CAPN1-206ENST00000526966 SERPINA10Q9UK55 444 aa23.71■■□□□ 1.39
CAPN1-206ENST00000526966 CENPFP49454 3210 aa23.7■■□□□ 1.38
CAPN1-206ENST00000526966 UTYO14607 1347 aa23.7■■□□□ 1.38
CAPN1-206ENST00000526966 GJA5P36382 358 aa23.7■■□□□ 1.38
CAPN1-206ENST00000526966 RBM5P52756 815 aaKnown RBP eCLIP23.7■■□□□ 1.38
CAPN1-206ENST00000526966 SLC4A10Q6U841 1118 aa23.7■■□□□ 1.38
CAPN1-206ENST00000526966 ANKRD13AQ8IZ07 590 aa23.7■■□□□ 1.38
CAPN1-206ENST00000526966 FAM84BQ96KN1 310 aaPredicted RBP23.7■■□□□ 1.38
CAPN1-206ENST00000526966 PUS3Q9BZE2 481 aaKnown RBP23.7■■□□□ 1.38
CAPN1-206ENST00000526966 RBBP6Q7Z6E9 1792 aaKnown RBP23.7■■□□□ 1.38
CAPN1-206ENST00000526966 HIBADHP31937 336 aaKnown RBP23.69■■□□□ 1.38
CAPN1-206ENST00000526966 GYG1P46976 350 aa23.69■■□□□ 1.38
CAPN1-206ENST00000526966 TNFAIP1Q13829 316 aa23.69■■□□□ 1.38
CAPN1-206ENST00000526966 ZNF70Q9UC06 446 aaPredicted RBP23.69■■□□□ 1.38
CAPN1-206ENST00000526966 TTF2Q9UNY4 1162 aaKnown RBP23.69■■□□□ 1.38
CAPN1-206ENST00000526966 RIPOR2Q9Y4F9 1068 aa23.68■■□□□ 1.38
CAPN1-206ENST00000526966 KIAA0100Q14667 2235 aaKnown RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 TESPA1A2RU30 521 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 NBPF7P0C2Y1 421 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 RABL6Q3YEC7 729 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 OTOP1Q7RTM1 612 aa23.67■■□□□ 1.38
CAPN1-206ENST00000526966 TEPSINQ96N21 525 aa23.67■■□□□ 1.38
CAPN1-206ENST00000526966 TDRD3Q9H7E2 651 aaKnown RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 MKI67P46013 3256 aaKnown RBP23.67■■□□□ 1.38
CAPN1-206ENST00000526966 MROH5Q6ZUA9 1318 aa23.66■■□□□ 1.38
CAPN1-206ENST00000526966 DZIP1LQ8IYY4 767 aaKnown RBP23.66■■□□□ 1.38
CAPN1-206ENST00000526966 TRIM17Q9Y577 477 aa23.66■■□□□ 1.38
CAPN1-206ENST00000526966 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
CAPN1-206ENST00000526966 CRHR2Q13324 411 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms