RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 CCDC85CA6NKD9 419 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 MYO1BO43795 1136 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 PLIN1O60240 522 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 NBPF7P0C2Y1 421 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 PRAMEF18Q5VWM3 479 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 CERS5Q8N5B7 392 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 PPP2R3BQ9Y5P8 575 aa13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 COL1A1P02452 1464 aaPredicted RBP13.99□□□□□ -0.17
AMBRA1-204ENST00000526545 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 DGKZQ13574 1117 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 MOB2Q70IA6 237 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 KAZALD1Q96I82 304 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 SUCLG2Q96I99 432 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 DEFB129Q9H1M3 183 aa13.98□□□□□ -0.17
AMBRA1-204ENST00000526545 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 HIBADHP31937 336 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 TM4SF4P48230 202 aa13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 TDRD7Q8NHU6 1098 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
AMBRA1-204ENST00000526545 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 RGS19P49795 217 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 SUPT20HL1Q3ZLR7 823 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 CFAP100Q494V2 611 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 LDLRAD1Q5T700 205 aa13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
AMBRA1-204ENST00000526545 F8W031 263 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 PPP1R12BO60237 982 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 PTPN12Q05209 780 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 SREBF2Q12772 1141 aa13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 FAM84BQ96KN1 310 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 PRMT6Q96LA8 375 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 SERPINA10Q9UK55 444 aa13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 A0A1B0GUL6 1792 aa13.95□□□□□ -0.18
AMBRA1-204ENST00000526545 GYG1P46976 350 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 INHBEP58166 350 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 NOM1Q5C9Z4 860 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 VPS37DQ86XT2 251 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
AMBRA1-204ENST00000526545 PDE8BO95263 885 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 TNFAIP1Q13829 316 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 PRKG1Q13976 671 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 FBXO33Q7Z6M2 555 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
AMBRA1-204ENST00000526545 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 MLLT1Q03111 559 aaPredicted RBP13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 SPRYD7Q5W111 196 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 TBC1D22AQ8WUA7 517 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 CFHR5Q9BXR6 569 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 TTF2Q9UNY4 1162 aaKnown RBP13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
AMBRA1-204ENST00000526545 MANSC4A6NHS7 340 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 HDLBPQ00341 1268 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 RASA3Q14644 834 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 VEZTQ9HBM0 779 aa13.91□□□□□ -0.18
AMBRA1-204ENST00000526545 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 NBPF12Q5TAG4 269 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 MRIQ9BWK5 157 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 ZNF70Q9UC06 446 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 HDAC5Q9UQL6 1122 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 ECM29Q5VYK3 1845 aa13.9□□□□□ -0.18
AMBRA1-204ENST00000526545 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.19
AMBRA1-204ENST00000526545 GPR25O00155 361 aa13.89□□□□□ -0.19
AMBRA1-204ENST00000526545 IFIT1P09914 478 aaKnown RBP13.89□□□□□ -0.19
AMBRA1-204ENST00000526545 CRKP46108 304 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms