RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 CSF1RP07333 972 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 DLGAP5Q15398 846 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-204ENST00000526468 CD209Q9NNX6 404 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 JAG2Q9Y219 1238 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
CAPN1-204ENST00000526468 SNAP23O00161 211 aa14.89□□□□□ -0.03
CAPN1-204ENST00000526468 PTPN12Q05209 780 aaKnown RBP14.89□□□□□ -0.03
CAPN1-204ENST00000526468 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
CAPN1-204ENST00000526468 CERS5Q8N5B7 392 aa14.89□□□□□ -0.03
CAPN1-204ENST00000526468 FZD1Q9UP38 647 aa14.89□□□□□ -0.03
CAPN1-204ENST00000526468 CLRN2A0PK11 232 aa14.88□□□□□ -0.03
CAPN1-204ENST00000526468 MYO1BO43795 1136 aa14.88□□□□□ -0.03
CAPN1-204ENST00000526468 ZBED3Q96IU2 234 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-204ENST00000526468 VEZTQ9HBM0 779 aa14.88□□□□□ -0.03
CAPN1-204ENST00000526468 CEP290O15078 2479 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 HTTP42858 3142 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 GPR25O00155 361 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 FOXO4P98177 505 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 PKN2Q16513 984 aaKnown RBP14.87□□□□□ -0.03
CAPN1-204ENST00000526468 CFAP100Q494V2 611 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 SPRYD7Q5W111 196 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 DEFB129Q9H1M3 183 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 PCDHAC2Q9Y5I4 1007 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 PPP2R3BQ9Y5P8 575 aa14.87□□□□□ -0.03
CAPN1-204ENST00000526468 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 GRM8O00222 908 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 PLIN1O60240 522 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 FKTNO75072 461 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 VAMP4O75379 141 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 TM4SF4P48230 202 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.03
CAPN1-204ENST00000526468 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 LMBR1LQ6UX01 489 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
CAPN1-204ENST00000526468 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-204ENST00000526468 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 MGAMO43451 1857 aa14.86□□□□□ -0.03
CAPN1-204ENST00000526468 CENPFP49454 3210 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 IL1R1P14778 569 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
CAPN1-204ENST00000526468 LDLRAD1Q5T700 205 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 WNK4Q96J92 1243 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 CLMNQ96JQ2 1002 aa14.85□□□□□ -0.03
CAPN1-204ENST00000526468 PTPRFP10586 1907 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 MANSC4A6NHS7 340 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 PPP1R12BO60237 982 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 ALDH1A1P00352 501 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 ZBTB48P10074 688 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 FBXO46Q6PJ61 603 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 MIER1Q8N108 512 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 MTMR14Q8NCE2 650 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-204ENST00000526468 AOX1Q06278 1338 aa14.84□□□□□ -0.03
CAPN1-204ENST00000526468 ANP32CO43423 234 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 FKBP1AP62942 108 aaKnown RBP14.83□□□□□ -0.04
CAPN1-204ENST00000526468 MFSD14BQ5SR56 506 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 LDHAL6AQ6ZMR3 332 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 SLC10A4Q96EP9 437 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 CFHR5Q9BXR6 569 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 R3HDMLQ9H3Y0 253 aa14.83□□□□□ -0.04
CAPN1-204ENST00000526468 IREB2P48200 963 aaKnown RBP14.82□□□□□ -0.04
CAPN1-204ENST00000526468 TNFAIP1Q13829 316 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 SUPT20HL1Q3ZLR7 823 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 PRPF38BQ5VTL8 546 aaKnown RBP14.82□□□□□ -0.04
CAPN1-204ENST00000526468 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 SRCIN1Q9C0H9 1055 aa14.82□□□□□ -0.04
CAPN1-204ENST00000526468 IGF2BP3O00425 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
CAPN1-204ENST00000526468 GYG1P46976 350 aa14.81□□□□□ -0.04
CAPN1-204ENST00000526468 NBPF12Q5TAG4 269 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-204ENST00000526468 PRMT6Q96LA8 375 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-204ENST00000526468 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-204ENST00000526468 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
CAPN1-204ENST00000526468 TRIM17Q9Y577 477 aa14.81□□□□□ -0.04
CAPN1-204ENST00000526468 FAM205AQ6ZU69 1335 aa14.81□□□□□ -0.04
CAPN1-204ENST00000526468 ATAD5Q96QE3 1844 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 BRCA2P51587 3418 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 ALDH1L1O75891 902 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 RASA3Q14644 834 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 SUCLG2Q96I99 432 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 DOCK1Q14185 1865 aa14.8□□□□□ -0.04
CAPN1-204ENST00000526468 ANKRD13AQ8IZ07 590 aa14.79□□□□□ -0.04
CAPN1-204ENST00000526468 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
CAPN1-204ENST00000526468 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
CAPN1-204ENST00000526468 GJA5P36382 358 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 INHBEP58166 350 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 CHAF1AQ13111 956 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-204ENST00000526468 CRHR2Q13324 411 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 UBE4AQ14139 1066 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms