RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 EPS15P42566 896 aa15.91■□□□□ 0.14
SMPD1-202ENST00000526280 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
SMPD1-202ENST00000526280 MXD3Q9BW11 206 aa15.91■□□□□ 0.14
SMPD1-202ENST00000526280 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
SMPD1-202ENST00000526280 SCN4AP35499 1836 aa15.91■□□□□ 0.14
SMPD1-202ENST00000526280 ZNF646O15015 1829 aaPredicted RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 MYO3BQ8WXR4 1341 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 SEMA3EO15041 775 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 CLASRPQ8N2M8 674 aaKnown RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 DBNDD2Q9BQY9 259 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 LRRCC1Q9C099 1032 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 CCDC8Q9H0W5 538 aaPredicted RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
SMPD1-202ENST00000526280 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
SMPD1-202ENST00000526280 EPHX2P34913 555 aa15.89■□□□□ 0.13
SMPD1-202ENST00000526280 AACSQ86V21 672 aa15.89■□□□□ 0.13
SMPD1-202ENST00000526280 CERS5Q8N5B7 392 aa15.89■□□□□ 0.13
SMPD1-202ENST00000526280 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-202ENST00000526280 SHTN1A0MZ66 631 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 H7C1D1 291 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 IGHDP01880 384 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 CHAF1AQ13111 956 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-202ENST00000526280 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
SMPD1-202ENST00000526280 DENND2AQ9ULE3 1009 aa15.88■□□□□ 0.13
SMPD1-202ENST00000526280 SMARCA5O60264 1052 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-202ENST00000526280 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 ARID4AP29374 1257 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-202ENST00000526280 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-202ENST00000526280 RASGRF1Q13972 1273 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 CCDC158Q5M9N0 1113 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 WDR66Q8TBY9 1149 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 TBC1D22AQ8WUA7 517 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 GCC1Q96CN9 775 aa15.87■□□□□ 0.13
SMPD1-202ENST00000526280 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
SMPD1-202ENST00000526280 COL1A1P02452 1464 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-202ENST00000526280 PDS5AQ29RF7 1337 aaKnown RBP15.86■□□□□ 0.13
SMPD1-202ENST00000526280 IFIT2P09913 472 aaKnown RBP15.86■□□□□ 0.13
SMPD1-202ENST00000526280 MMP14P50281 582 aa15.86■□□□□ 0.13
SMPD1-202ENST00000526280 PNMA8AQ86V59 439 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-202ENST00000526280 KIAA0825Q8IV33 1275 aa15.86■□□□□ 0.13
SMPD1-202ENST00000526280 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-202ENST00000526280 TTC39AQ5SRH9 613 aa15.85■□□□□ 0.13
SMPD1-202ENST00000526280 USP50Q70EL3 339 aaPredicted RBP15.85■□□□□ 0.13
SMPD1-202ENST00000526280 C16orf71Q8IYS4 520 aaPredicted RBP15.85■□□□□ 0.13
SMPD1-202ENST00000526280 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
SMPD1-202ENST00000526280 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
SMPD1-202ENST00000526280 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
SMPD1-202ENST00000526280 MYH13Q9UKX3 1938 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 MCAMP43121 646 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SCARF1Q14162 830 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SAMD7Q7Z3H4 446 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SMC5Q8IY18 1101 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SPATA5Q8NB90 893 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SUGT1Q9Y2Z0 365 aa15.84■□□□□ 0.13
SMPD1-202ENST00000526280 SALL1Q9NSC2 1324 aa15.83■□□□□ 0.13
SMPD1-202ENST00000526280 TOMM70O94826 608 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 EGFRP00533 1210 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 POTEJP0CG39 1038 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 HIRAP54198 1017 aaPredicted RBP15.83■□□□□ 0.12
SMPD1-202ENST00000526280 GRIK5Q16478 980 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.12
SMPD1-202ENST00000526280 EAPPQ56P03 285 aaPredicted RBP15.83■□□□□ 0.12
SMPD1-202ENST00000526280 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 PI16Q6UXB8 463 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 HDAC9Q9UKV0 1011 aa15.83■□□□□ 0.12
SMPD1-202ENST00000526280 F8W031 263 aaPredicted RBP15.82■□□□□ 0.12
SMPD1-202ENST00000526280 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
SMPD1-202ENST00000526280 RBM26Q5T8P6 1007 aaKnown RBP15.82■□□□□ 0.12
SMPD1-202ENST00000526280 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
SMPD1-202ENST00000526280 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
SMPD1-202ENST00000526280 TTF2Q9UNY4 1162 aaKnown RBP15.82■□□□□ 0.12
SMPD1-202ENST00000526280 AKAP11Q9UKA4 1901 aa15.81■□□□□ 0.12
SMPD1-202ENST00000526280 NEFLP07196 543 aa15.81■□□□□ 0.12
SMPD1-202ENST00000526280 ZGPATQ8N5A5 531 aaKnown RBP15.81■□□□□ 0.12
SMPD1-202ENST00000526280 ZC3H15Q8WU90 426 aaKnown RBP15.81■□□□□ 0.12
SMPD1-202ENST00000526280 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
SMPD1-202ENST00000526280 ADAMTSL1Q8N6G6 1762 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 LDHBP07195 334 aaKnown RBP15.8■□□□□ 0.12
SMPD1-202ENST00000526280 PRDX5P30044 214 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 MTMR14Q8NCE2 650 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.8■□□□□ 0.12
SMPD1-202ENST00000526280 MRIQ9BWK5 157 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
SMPD1-202ENST00000526280 ABCF2Q9UG63 623 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 PGAP2Q9UHJ9 254 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
SMPD1-202ENST00000526280 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-202ENST00000526280 ATP5JP18859 108 aa15.79■□□□□ 0.12
SMPD1-202ENST00000526280 ZAP70P43403 619 aa15.79■□□□□ 0.12
SMPD1-202ENST00000526280 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms