RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 CTU1Q7Z7A3 348 aaKnown RBP21.53■■□□□ 1.04
CCS-204ENST00000526066 SOX10P56693 466 aa21.52■■□□□ 1.04
CCS-204ENST00000526066 TTLL12Q14166 644 aaPredicted RBP21.52■■□□□ 1.04
CCS-204ENST00000526066 RASAL3Q86YV0 1011 aa21.52■■□□□ 1.04
CCS-204ENST00000526066 OGFOD1Q8N543 542 aa21.52■■□□□ 1.04
CCS-204ENST00000526066 JARID2Q92833 1246 aaPredicted RBP21.52■■□□□ 1.04
CCS-204ENST00000526066 NF2P35240 595 aa21.51■■□□□ 1.03
CCS-204ENST00000526066 SUCLG2Q96I99 432 aa21.51■■□□□ 1.03
CCS-204ENST00000526066 HDAC9Q9UKV0 1011 aa21.51■■□□□ 1.03
CCS-204ENST00000526066 FBXW7Q969H0 707 aa21.5■■□□□ 1.03
CCS-204ENST00000526066 KAZALD1Q96I82 304 aa21.5■■□□□ 1.03
CCS-204ENST00000526066 LRRFIP2Q9Y608 721 aaKnown RBP21.5■■□□□ 1.03
CCS-204ENST00000526066 ERICH6BQ5W0A0 696 aa21.49■■□□□ 1.03
CCS-204ENST00000526066 CTSWP56202 376 aa21.48■■□□□ 1.03
CCS-204ENST00000526066 FOXO4P98177 505 aa21.48■■□□□ 1.03
CCS-204ENST00000526066 RABL6Q3YEC7 729 aaPredicted RBP21.48■■□□□ 1.03
CCS-204ENST00000526066 MYO3BQ8WXR4 1341 aa21.48■■□□□ 1.03
CCS-204ENST00000526066 SPEF2Q9C093 1822 aa21.48■■□□□ 1.03
CCS-204ENST00000526066 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
CCS-204ENST00000526066 MYH3P11055 1940 aa21.47■■□□□ 1.03
CCS-204ENST00000526066 PKN2Q16513 984 aaKnown RBP21.47■■□□□ 1.03
CCS-204ENST00000526066 EPHA10Q5JZY3 1008 aa21.47■■□□□ 1.03
CCS-204ENST00000526066 GMLQ99445 158 aa21.47■■□□□ 1.03
CCS-204ENST00000526066 BICC1Q9H694 974 aaKnown RBP21.47■■□□□ 1.03
CCS-204ENST00000526066 TNRC18O15417 2968 aaPredicted RBP21.47■■□□□ 1.03
CCS-204ENST00000526066 CSF1RP07333 972 aa21.46■■□□□ 1.03
CCS-204ENST00000526066 MTX1Q13505 466 aa21.46■■□□□ 1.03
CCS-204ENST00000526066 ANKRD44Q8N8A2 993 aa21.46■■□□□ 1.03
CCS-204ENST00000526066 C1orf115Q9H7X2 142 aa21.46■■□□□ 1.03
CCS-204ENST00000526066 UBE2Q2LH0YL09 131 aa21.45■■□□□ 1.02
CCS-204ENST00000526066 RPAP2Q8IXW5 612 aaPredicted RBP21.45■■□□□ 1.02
CCS-204ENST00000526066 MMP14P50281 582 aa21.44■■□□□ 1.02
CCS-204ENST00000526066 SREBF2Q12772 1141 aa21.44■■□□□ 1.02
CCS-204ENST00000526066 CEP85Q6P2H3 762 aa21.44■■□□□ 1.02
CCS-204ENST00000526066 LMBR1LQ6UX01 489 aa21.44■■□□□ 1.02
CCS-204ENST00000526066 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
CCS-204ENST00000526066 BSDC1Q9NW68 430 aaPredicted RBP21.44■■□□□ 1.02
CCS-204ENST00000526066 IGHMBP2P38935 993 aaKnown RBP21.43■■□□□ 1.02
CCS-204ENST00000526066 NBPF9Q3BBW0 867 aa21.43■■□□□ 1.02
CCS-204ENST00000526066 STRIP1Q5VSL9 837 aa21.43■■□□□ 1.02
CCS-204ENST00000526066 MOB2Q70IA6 237 aa21.43■■□□□ 1.02
CCS-204ENST00000526066 COA1Q9GZY4 146 aa21.43■■□□□ 1.02
CCS-204ENST00000526066 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
CCS-204ENST00000526066 TBC1D8O95759 1140 aa21.42■■□□□ 1.02
CCS-204ENST00000526066 ATP8B2P98198 1209 aa21.42■■□□□ 1.02
CCS-204ENST00000526066 ARMC9Q7Z3E5 817 aa21.42■■□□□ 1.02
CCS-204ENST00000526066 MINPP1Q9UNW1 487 aa21.42■■□□□ 1.02
CCS-204ENST00000526066 SCAF8Q9UPN6 1271 aaKnown RBP21.42■■□□□ 1.02
CCS-204ENST00000526066 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
CCS-204ENST00000526066 DACT2Q5SW24 774 aa21.41■■□□□ 1.02
CCS-204ENST00000526066 PRAMEF18Q5VWM3 479 aa21.41■■□□□ 1.02
CCS-204ENST00000526066 APOBEC3FQ8IUX4 373 aaKnown RBP21.41■■□□□ 1.02
CCS-204ENST00000526066 ZNF296Q8WUU4 475 aaPredicted RBP21.41■■□□□ 1.02
CCS-204ENST00000526066 GREM2Q9H772 168 aa21.41■■□□□ 1.02
CCS-204ENST00000526066 LEMD3Q9Y2U8 911 aa21.41■■□□□ 1.02
CCS-204ENST00000526066 WNT10BO00744 389 aa21.4■■□□□ 1.02
CCS-204ENST00000526066 KCNJ4P48050 445 aa21.4■■□□□ 1.02
CCS-204ENST00000526066 ANKRD2Q9GZV1 360 aa21.4■■□□□ 1.02
CCS-204ENST00000526066 SRGAP3O43295 1099 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 HMMRO75330 724 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 MKRN3Q13064 507 aaKnown RBP21.39■■□□□ 1.01
CCS-204ENST00000526066 POLA2Q14181 598 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 PRPF38BQ5VTL8 546 aaKnown RBP21.39■■□□□ 1.01
CCS-204ENST00000526066 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 SSH3Q8TE77 659 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 MPHOSPH8Q99549 860 aa21.39■■□□□ 1.01
CCS-204ENST00000526066 PNMA6EA0A0J9YXQ4 647 aa21.38■■□□□ 1.01
CCS-204ENST00000526066 SASH1O94885 1247 aa21.38■■□□□ 1.01
CCS-204ENST00000526066 TM4SF4P48230 202 aa21.38■■□□□ 1.01
CCS-204ENST00000526066 MXD3Q9BW11 206 aa21.38■■□□□ 1.01
CCS-204ENST00000526066 CHMP3Q9Y3E7 222 aa21.38■■□□□ 1.01
CCS-204ENST00000526066 ZNF804BA4D1E1 1349 aa21.37■■□□□ 1.01
CCS-204ENST00000526066 GPR25O00155 361 aa21.37■■□□□ 1.01
CCS-204ENST00000526066 IFIT5Q13325 482 aaKnown RBP21.37■■□□□ 1.01
CCS-204ENST00000526066 PRKG1Q13976 671 aa21.37■■□□□ 1.01
CCS-204ENST00000526066 CCDC57Q2TAC2 916 aa21.37■■□□□ 1.01
CCS-204ENST00000526066 NOM1Q5C9Z4 860 aaKnown RBP21.37■■□□□ 1.01
CCS-204ENST00000526066 TTLL5Q6EMB2 1281 aa21.37■■□□□ 1.01
CCS-204ENST00000526066 ANKRD18BA2A2Z9 1011 aa21.36■■□□□ 1.01
CCS-204ENST00000526066 ITGA6P23229 1130 aa21.36■■□□□ 1.01
CCS-204ENST00000526066 RFX5P48382 616 aaPredicted RBP21.36■■□□□ 1.01
CCS-204ENST00000526066 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
CCS-204ENST00000526066 KIAA0825Q8IV33 1275 aa21.36■■□□□ 1.01
CCS-204ENST00000526066 COL1A1P02452 1464 aaPredicted RBP21.35■■□□□ 1.01
CCS-204ENST00000526066 WTIPA6NIX2 430 aaPredicted RBP21.35■■□□□ 1.01
CCS-204ENST00000526066 FKTNO75072 461 aa21.35■■□□□ 1.01
CCS-204ENST00000526066 ALDH1A1P00352 501 aa21.35■■□□□ 1.01
CCS-204ENST00000526066 FBXO46Q6PJ61 603 aaPredicted RBP21.35■■□□□ 1.01
CCS-204ENST00000526066 ANGEL1Q9UNK9 670 aaKnown RBP21.35■■□□□ 1.01
CCS-204ENST00000526066 GTF2IP78347 998 aa21.34■■□□□ 1.01
CCS-204ENST00000526066 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
CCS-204ENST00000526066 ZNF646O15015 1829 aaPredicted RBP21.34■■□□□ 1.01
CCS-204ENST00000526066 PTPN12Q05209 780 aaKnown RBP21.33■■□□□ 1.01
CCS-204ENST00000526066 DLGAP5Q15398 846 aa21.33■■□□□ 1.01
CCS-204ENST00000526066 FBXO3Q9UK99 471 aa21.33■■□□□ 1.01
CCS-204ENST00000526066 MYO1BO43795 1136 aa21.32■■□□□ 1
CCS-204ENST00000526066 INHBEP58166 350 aa21.32■■□□□ 1
CCS-204ENST00000526066 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
CCS-204ENST00000526066 RWDD1Q9H446 243 aaPredicted RBP21.32■■□□□ 1
CCS-204ENST00000526066 PPP4R2Q9NY27 417 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms