RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 ANKRD44Q8N8A2 993 aa30.84■■■□□ 2.53
ROM1-203ENST00000525947 RABL6Q3YEC7 729 aaPredicted RBP30.82■■■□□ 2.52
ROM1-203ENST00000525947 CCDC102AQ96A19 550 aa30.82■■■□□ 2.52
ROM1-203ENST00000525947 USP44Q9H0E7 712 aa30.82■■■□□ 2.52
ROM1-203ENST00000525947 GYG1P46976 350 aa30.81■■■□□ 2.52
ROM1-203ENST00000525947 LRRC24Q50LG9 513 aa30.81■■■□□ 2.52
ROM1-203ENST00000525947 RIPOR2Q9Y4F9 1068 aa30.81■■■□□ 2.52
ROM1-203ENST00000525947 PCDHAC2Q9Y5I4 1007 aa30.81■■■□□ 2.52
ROM1-203ENST00000525947 MMP14P50281 582 aa30.8■■■□□ 2.52
ROM1-203ENST00000525947 KIF23Q02241 960 aaPredicted RBP30.8■■■□□ 2.52
ROM1-203ENST00000525947 UBE4AQ14139 1066 aa30.8■■■□□ 2.52
ROM1-203ENST00000525947 KLHDC4Q8TBB5 520 aa30.8■■■□□ 2.52
ROM1-203ENST00000525947 UBE2Q2LH0YL09 131 aa30.79■■■□□ 2.52
ROM1-203ENST00000525947 TTLL12Q14166 644 aaPredicted RBP30.79■■■□□ 2.52
ROM1-203ENST00000525947 DLGAP5Q15398 846 aa30.79■■■□□ 2.52
ROM1-203ENST00000525947 SLC10A3P09131 477 aa30.78■■■□□ 2.52
ROM1-203ENST00000525947 ZBED3Q96IU2 234 aaPredicted RBP30.78■■■□□ 2.52
ROM1-203ENST00000525947 MROH5Q6ZUA9 1318 aa30.77■■■□□ 2.52
ROM1-203ENST00000525947 CA12O43570 354 aa30.77■■■□□ 2.52
ROM1-203ENST00000525947 HIBADHP31937 336 aaKnown RBP30.77■■■□□ 2.52
ROM1-203ENST00000525947 METTL24Q5JXM2 366 aa30.77■■■□□ 2.52
ROM1-203ENST00000525947 NOB1Q9ULX3 412 aaKnown RBP30.77■■■□□ 2.52
ROM1-203ENST00000525947 APOBEC3FQ8IUX4 373 aaKnown RBP30.76■■■□□ 2.51
ROM1-203ENST00000525947 FAM84BQ96KN1 310 aaPredicted RBP30.76■■■□□ 2.51
ROM1-203ENST00000525947 FKBP1BP68106 108 aa30.75■■■□□ 2.51
ROM1-203ENST00000525947 PRKG1Q13976 671 aa30.75■■■□□ 2.51
ROM1-203ENST00000525947 CFAP100Q494V2 611 aa30.75■■■□□ 2.51
ROM1-203ENST00000525947 RASAL3Q86YV0 1011 aa30.75■■■□□ 2.51
ROM1-203ENST00000525947 TDRD7Q8NHU6 1098 aaKnown RBP30.75■■■□□ 2.51
ROM1-203ENST00000525947 NF2P35240 595 aa30.74■■■□□ 2.51
ROM1-203ENST00000525947 FKBP1AP62942 108 aaKnown RBP30.74■■■□□ 2.51
ROM1-203ENST00000525947 IQSEC3Q9UPP2 1182 aaPredicted RBP30.74■■■□□ 2.51
ROM1-203ENST00000525947 RBM5P52756 815 aaKnown RBP eCLIP30.73■■■□□ 2.51
ROM1-203ENST00000525947 FAM205AQ6ZU69 1335 aa30.73■■■□□ 2.51
ROM1-203ENST00000525947 CLRN2A0PK11 232 aa30.72■■■□□ 2.51
ROM1-203ENST00000525947 PRMT6Q96LA8 375 aaPredicted RBP30.72■■■□□ 2.51
ROM1-203ENST00000525947 AOX1Q06278 1338 aa30.72■■■□□ 2.51
ROM1-203ENST00000525947 MFSD14BQ5SR56 506 aa30.71■■■□□ 2.51
ROM1-203ENST00000525947 VPS37DQ86XT2 251 aa30.71■■■□□ 2.51
ROM1-203ENST00000525947 MTMR14Q8NCE2 650 aa30.71■■■□□ 2.51
ROM1-203ENST00000525947 CSRNP1Q96S65 589 aa30.71■■■□□ 2.51
ROM1-203ENST00000525947 CT47B1P0C2W7 299 aaPredicted RBP30.7■■■□□ 2.51
ROM1-203ENST00000525947 FZD1Q9UP38 647 aa30.7■■■□□ 2.51
ROM1-203ENST00000525947 AK9Q5TCS8 1911 aa30.7■■■□□ 2.51
ROM1-203ENST00000525947 TRPA1O75762 1119 aa30.69■■■□□ 2.5
ROM1-203ENST00000525947 PDE8BO95263 885 aa30.69■■■□□ 2.5
ROM1-203ENST00000525947 CHAF1AQ13111 956 aaPredicted RBP30.69■■■□□ 2.5
ROM1-203ENST00000525947 VGLL2Q8N8G2 317 aa30.69■■■□□ 2.5
ROM1-203ENST00000525947 DEFB129Q9H1M3 183 aa30.69■■■□□ 2.5
ROM1-203ENST00000525947 VEZTQ9HBM0 779 aa30.69■■■□□ 2.5
ROM1-203ENST00000525947 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.69■■■□□ 2.5
ROM1-203ENST00000525947 TTF2Q9UNY4 1162 aaKnown RBP30.69■■■□□ 2.5
ROM1-203ENST00000525947 OTOFQ9HC10 1997 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 SPDYE2BA6NHP3 402 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 MYO1BO43795 1136 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 SPDYE6P0CI01 402 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 FBXO33Q7Z6M2 555 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 ABHD8Q96I13 439 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 RNF186Q9NXI6 227 aa30.68■■■□□ 2.5
ROM1-203ENST00000525947 UBTFL1P0CB47 393 aaPredicted RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 RFX5P48382 616 aaPredicted RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 MKRN3Q13064 507 aaKnown RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 API5Q9BZZ5 524 aaKnown RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 ANGEL1Q9UNK9 670 aaKnown RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 COL1A1P02452 1464 aaPredicted RBP30.67■■■□□ 2.5
ROM1-203ENST00000525947 FRAT2O75474 233 aaPredicted RBP30.66■■■□□ 2.5
ROM1-203ENST00000525947 RARSP54136 660 aaKnown RBP30.66■■■□□ 2.5
ROM1-203ENST00000525947 CAVIN4Q5BKX8 364 aa30.66■■■□□ 2.5
ROM1-203ENST00000525947 ARMC9Q7Z3E5 817 aa30.66■■■□□ 2.5
ROM1-203ENST00000525947 PTPN12Q05209 780 aaKnown RBP30.65■■■□□ 2.5
ROM1-203ENST00000525947 BCAMP50895 628 aa30.64■■■□□ 2.5
ROM1-203ENST00000525947 GRIK5Q16478 980 aa30.64■■■□□ 2.5
ROM1-203ENST00000525947 SIL1Q9H173 461 aa30.64■■■□□ 2.5
ROM1-203ENST00000525947 EYA2O00167 538 aa30.63■■■□□ 2.49
ROM1-203ENST00000525947 SAGE1Q9NXZ1 904 aa30.63■■■□□ 2.49
ROM1-203ENST00000525947 LRRFIP2Q9Y608 721 aaKnown RBP30.63■■■□□ 2.49
ROM1-203ENST00000525947 LAMB1P07942 1786 aa30.63■■■□□ 2.49
ROM1-203ENST00000525947 SSC5DA1L4H1 1573 aa30.62■■■□□ 2.49
ROM1-203ENST00000525947 TDRD3Q9H7E2 651 aaKnown RBP30.62■■■□□ 2.49
ROM1-203ENST00000525947 PUM3Q15397 648 aaKnown RBP30.61■■■□□ 2.49
ROM1-203ENST00000525947 MIER1Q8N108 512 aa30.61■■■□□ 2.49
ROM1-203ENST00000525947 IFIT1P09914 478 aaKnown RBP30.6■■■□□ 2.49
ROM1-203ENST00000525947 FGFR2P21802 821 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 CRKP46108 304 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 ATG9AQ7Z3C6 839 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 REM2Q8IYK8 340 aaPredicted RBP30.6■■■□□ 2.49
ROM1-203ENST00000525947 MEIS3Q99687 375 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 MCOLN1Q9GZU1 580 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 ZNF70Q9UC06 446 aaPredicted RBP30.6■■■□□ 2.49
ROM1-203ENST00000525947 SERPINA10Q9UK55 444 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 MYH2Q9UKX2 1941 aa30.6■■■□□ 2.49
ROM1-203ENST00000525947 DGKZQ13574 1117 aa30.59■■■□□ 2.49
ROM1-203ENST00000525947 NBPF12Q5TAG4 269 aaPredicted RBP30.59■■■□□ 2.49
ROM1-203ENST00000525947 PPP2R3BQ9Y5P8 575 aa30.59■■■□□ 2.49
ROM1-203ENST00000525947 RASA3Q14644 834 aa30.58■■■□□ 2.49
ROM1-203ENST00000525947 LDLRAD1Q5T700 205 aa30.58■■■□□ 2.49
ROM1-203ENST00000525947 DZIP1LQ8IYY4 767 aaKnown RBP30.58■■■□□ 2.49
ROM1-203ENST00000525947 KIF16BQ96L93 1317 aa30.57■■■□□ 2.48
ROM1-203ENST00000525947 CCDC85CA6NKD9 419 aa30.57■■■□□ 2.48
ROM1-203ENST00000525947 SLC5A1P13866 664 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms