RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 IL1R1P14778 569 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 MAP2K2P36507 400 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 MOB2Q70IA6 237 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 PITPNM2Q9BZ72 1349 aa13.12□□□□□ -0.31
RBBP4-216ENST00000525506 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
RBBP4-216ENST00000525506 TRIM27P14373 513 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 GYG1P46976 350 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
RBBP4-216ENST00000525506 ZNF157P51786 506 aaPredicted RBP13.1□□□□□ -0.31
RBBP4-216ENST00000525506 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
RBBP4-216ENST00000525506 ZBED3Q96IU2 234 aaPredicted RBP13.1□□□□□ -0.31
RBBP4-216ENST00000525506 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
RBBP4-216ENST00000525506 AOX1Q06278 1338 aa13.1□□□□□ -0.31
RBBP4-216ENST00000525506 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 BCAR3O75815 825 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
RBBP4-216ENST00000525506 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
RBBP4-216ENST00000525506 MYH13Q9UKX3 1938 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
RBBP4-216ENST00000525506 GNAI3P08754 354 aa13.08□□□□□ -0.32
RBBP4-216ENST00000525506 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
RBBP4-216ENST00000525506 NOGQ13253 232 aa13.08□□□□□ -0.32
RBBP4-216ENST00000525506 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
RBBP4-216ENST00000525506 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
RBBP4-216ENST00000525506 TDRD7Q8NHU6 1098 aaKnown RBP13.08□□□□□ -0.32
RBBP4-216ENST00000525506 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
RBBP4-216ENST00000525506 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
RBBP4-216ENST00000525506 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
RBBP4-216ENST00000525506 PRKG1Q13976 671 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
RBBP4-216ENST00000525506 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
RBBP4-216ENST00000525506 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
RBBP4-216ENST00000525506 PDE8BO95263 885 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 SLC10A3P09131 477 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 MMP14P50281 582 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 BCAMP50895 628 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 GRIK5Q16478 980 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 MFSD14BQ5SR56 506 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
RBBP4-216ENST00000525506 FAM205AQ6ZU69 1335 aa13.06□□□□□ -0.32
RBBP4-216ENST00000525506 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 MS4A1P11836 297 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 MTX1Q13505 466 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 MTMR14Q8NCE2 650 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 MEIS3Q99687 375 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 SIL1Q9H173 461 aa13.05□□□□□ -0.32
RBBP4-216ENST00000525506 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
RBBP4-216ENST00000525506 EYA2O00167 538 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 FGFR2P21802 821 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 FKBP1BP68106 108 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
RBBP4-216ENST00000525506 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
RBBP4-216ENST00000525506 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
RBBP4-216ENST00000525506 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
RBBP4-216ENST00000525506 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
RBBP4-216ENST00000525506 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
RBBP4-216ENST00000525506 CA12O43570 354 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 FRAT2O75474 233 aaPredicted RBP13.03□□□□□ -0.32
RBBP4-216ENST00000525506 TRPA1O75762 1119 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 CIAO1O76071 339 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 NF2P35240 595 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
RBBP4-216ENST00000525506 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 RNF186Q9NXI6 227 aa13.03□□□□□ -0.32
RBBP4-216ENST00000525506 GNAI2P04899 355 aa13.02□□□□□ -0.33
RBBP4-216ENST00000525506 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
RBBP4-216ENST00000525506 TMEM57Q8N5G2 664 aa13.02□□□□□ -0.33
RBBP4-216ENST00000525506 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.33
RBBP4-216ENST00000525506 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms