RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
CCS-202ENST00000525435 LRRCC1Q9C099 1032 aa15.21■□□□□ 0.03
CCS-202ENST00000525435 CNOT7Q9UIV1 285 aaKnown RBP15.21■□□□□ 0.03
CCS-202ENST00000525435 SUGT1Q9Y2Z0 365 aa15.21■□□□□ 0.03
CCS-202ENST00000525435 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
CCS-202ENST00000525435 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
CCS-202ENST00000525435 ZNF280AP59817 542 aaPredicted RBP15.2■□□□□ 0.02
CCS-202ENST00000525435 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
CCS-202ENST00000525435 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
CCS-202ENST00000525435 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
CCS-202ENST00000525435 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
CCS-202ENST00000525435 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
CCS-202ENST00000525435 KIF3CO14782 793 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 IGSF3O75054 1194 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 EPHX2P34913 555 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 EPS15P42566 896 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 PHKA1P46020 1223 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 AACSQ86V21 672 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 MRIQ9BWK5 157 aa15.19■□□□□ 0.02
CCS-202ENST00000525435 TIAM2Q8IVF5 1701 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 TOMM70O94826 608 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
CCS-202ENST00000525435 ARID4AP29374 1257 aaPredicted RBP15.18■□□□□ 0.02
CCS-202ENST00000525435 C1QTNF8P60827 252 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
CCS-202ENST00000525435 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
CCS-202ENST00000525435 FBXW7Q969H0 707 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 DBNLQ9UJU6 430 aaKnown RBP15.18■□□□□ 0.02
CCS-202ENST00000525435 HDAC9Q9UKV0 1011 aa15.18■□□□□ 0.02
CCS-202ENST00000525435 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
CCS-202ENST00000525435 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
CCS-202ENST00000525435 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
CCS-202ENST00000525435 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
CCS-202ENST00000525435 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
CCS-202ENST00000525435 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
CCS-202ENST00000525435 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
CCS-202ENST00000525435 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
CCS-202ENST00000525435 A0A1B0GUL6 1792 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 APBB1O00213 710 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 HDLBPQ00341 1268 aaKnown RBP15.16■□□□□ 0.02
CCS-202ENST00000525435 RASGRF1Q13972 1273 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 CERS5Q8N5B7 392 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
CCS-202ENST00000525435 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
CCS-202ENST00000525435 PGAP2Q9UHJ9 254 aa15.16■□□□□ 0.02
CCS-202ENST00000525435 NEFLP07196 543 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 CHAF1AQ13111 956 aaPredicted RBP15.15■□□□□ 0.02
CCS-202ENST00000525435 SPTY2D1Q68D10 685 aaPredicted RBP15.15■□□□□ 0.02
CCS-202ENST00000525435 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 MTMR14Q8NCE2 650 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCS-202ENST00000525435 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
CCS-202ENST00000525435 IGHDP01880 384 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 ERICH6BQ5W0A0 696 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 SERPINA10Q9UK55 444 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 SCN4AP35499 1836 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 MAST3O60307 1309 aa15.14■□□□□ 0.01
CCS-202ENST00000525435 MCAMP43121 646 aa15.13■□□□□ 0.01
CCS-202ENST00000525435 FSTL1Q12841 308 aa15.13■□□□□ 0.01
CCS-202ENST00000525435 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
CCS-202ENST00000525435 TMED8Q6PL24 325 aaPredicted RBP15.13■□□□□ 0.01
CCS-202ENST00000525435 SAMD7Q7Z3H4 446 aa15.13■□□□□ 0.01
CCS-202ENST00000525435 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
CCS-202ENST00000525435 TTF2Q9UNY4 1162 aaKnown RBP15.13■□□□□ 0.01
CCS-202ENST00000525435 JAG2Q9Y219 1238 aa15.13■□□□□ 0.01
CCS-202ENST00000525435 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
CCS-202ENST00000525435 LDHBP07195 334 aaKnown RBP15.12■□□□□ 0.01
CCS-202ENST00000525435 ATP5JP18859 108 aa15.12■□□□□ 0.01
CCS-202ENST00000525435 HIRAP54198 1017 aaPredicted RBP15.12■□□□□ 0.01
CCS-202ENST00000525435 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
CCS-202ENST00000525435 EAPPQ56P03 285 aaPredicted RBP15.12■□□□□ 0.01
CCS-202ENST00000525435 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
CCS-202ENST00000525435 SMC1BQ8NDV3 1235 aa15.12■□□□□ 0.01
CCS-202ENST00000525435 GPATCH3Q96I76 525 aa15.12■□□□□ 0.01
CCS-202ENST00000525435 ZBED3Q96IU2 234 aaPredicted RBP15.12■□□□□ 0.01
CCS-202ENST00000525435 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 SCARF1Q14162 830 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 DLGAP5Q15398 846 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
CCS-202ENST00000525435 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 SLF2Q8IX21 1173 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 ECHDC1Q9NTX5 307 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
CCS-202ENST00000525435 F8W031 263 aaPredicted RBP15.1■□□□□ 0.01
CCS-202ENST00000525435 NUCB1Q02818 461 aa15.1■□□□□ 0.01
CCS-202ENST00000525435 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
CCS-202ENST00000525435 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
CCS-202ENST00000525435 TRPM4Q8TD43 1214 aa15.1■□□□□ 0.01
CCS-202ENST00000525435 TEKT1Q969V4 418 aa15.1■□□□□ 0.01
CCS-202ENST00000525435 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
CCS-202ENST00000525435 ZDHHC15Q96MV8 337 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms