RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 F8W031 263 aaPredicted RBP30.47■■■□□ 2.47
USP47-205ENST00000525257 PKN2Q16513 984 aaKnown RBP30.47■■■□□ 2.47
USP47-205ENST00000525257 LDLRAD1Q5T700 205 aa30.47■■■□□ 2.47
USP47-205ENST00000525257 C15orf52Q6ZUT6 534 aaKnown RBP30.47■■■□□ 2.47
USP47-205ENST00000525257 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.47■■■□□ 2.47
USP47-205ENST00000525257 BEND3Q5T5X7 828 aa30.46■■■□□ 2.47
USP47-205ENST00000525257 SPRYD7Q5W111 196 aa30.46■■■□□ 2.47
USP47-205ENST00000525257 ZNF804AQ7Z570 1209 aa30.46■■■□□ 2.47
USP47-205ENST00000525257 WDR63Q8IWG1 891 aa30.45■■■□□ 2.47
USP47-205ENST00000525257 JAG2Q9Y219 1238 aa30.45■■■□□ 2.47
USP47-205ENST00000525257 SSC5DA1L4H1 1573 aa30.45■■■□□ 2.46
USP47-205ENST00000525257 IL1R1P14778 569 aa30.44■■■□□ 2.46
USP47-205ENST00000525257 LMBR1LQ6UX01 489 aa30.44■■■□□ 2.46
USP47-205ENST00000525257 MTMR14Q8NCE2 650 aa30.44■■■□□ 2.46
USP47-205ENST00000525257 R3HDMLQ9H3Y0 253 aa30.44■■■□□ 2.46
USP47-205ENST00000525257 CLRN2A0PK11 232 aa30.43■■■□□ 2.46
USP47-205ENST00000525257 CFAP100Q494V2 611 aa30.43■■■□□ 2.46
USP47-205ENST00000525257 NOM1Q5C9Z4 860 aaKnown RBP30.43■■■□□ 2.46
USP47-205ENST00000525257 EPHA10Q5JZY3 1008 aa30.43■■■□□ 2.46
USP47-205ENST00000525257 ZNF594Q96JF6 807 aaPredicted RBP30.43■■■□□ 2.46
USP47-205ENST00000525257 PLIN1O60240 522 aa30.42■■■□□ 2.46
USP47-205ENST00000525257 TAF7LQ5H9L4 462 aa30.42■■■□□ 2.46
USP47-205ENST00000525257 FKTNO75072 461 aa30.41■■■□□ 2.46
USP47-205ENST00000525257 CCDC57Q2TAC2 916 aa30.41■■■□□ 2.46
USP47-205ENST00000525257 SLC10A4Q96EP9 437 aa30.41■■■□□ 2.46
USP47-205ENST00000525257 CFHR5Q9BXR6 569 aa30.41■■■□□ 2.46
USP47-205ENST00000525257 PPP2R3BQ9Y5P8 575 aa30.41■■■□□ 2.46
USP47-205ENST00000525257 SPDYE2BA6NHP3 402 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 MYO1BO43795 1136 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 SPDYE6P0CI01 402 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 LDHAL6AQ6ZMR3 332 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 CLMNQ96JQ2 1002 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 VEZTQ9HBM0 779 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 CNNM1Q9NRU3 951 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 AOX1Q06278 1338 aa30.4■■■□□ 2.46
USP47-205ENST00000525257 GRM8O00222 908 aa30.39■■■□□ 2.46
USP47-205ENST00000525257 PPP1R12BO60237 982 aaPredicted RBP30.39■■■□□ 2.46
USP47-205ENST00000525257 FKBP1AP62942 108 aaKnown RBP30.39■■■□□ 2.46
USP47-205ENST00000525257 MAP3K11Q16584 847 aa30.39■■■□□ 2.46
USP47-205ENST00000525257 FBXO46Q6PJ61 603 aaPredicted RBP30.39■■■□□ 2.46
USP47-205ENST00000525257 PRMT6Q96LA8 375 aaPredicted RBP30.39■■■□□ 2.46
USP47-205ENST00000525257 SPINK5Q9NQ38 1064 aaPredicted RBP30.39■■■□□ 2.46
USP47-205ENST00000525257 MANSC4A6NHS7 340 aaPredicted RBP30.37■■■□□ 2.45
USP47-205ENST00000525257 ALDH1A1P00352 501 aa30.37■■■□□ 2.45
USP47-205ENST00000525257 RBM5P52756 815 aaKnown RBP eCLIP30.37■■■□□ 2.45
USP47-205ENST00000525257 WNK4Q96J92 1243 aa30.37■■■□□ 2.45
USP47-205ENST00000525257 SUPT20HL1Q3ZLR7 823 aa30.36■■■□□ 2.45
USP47-205ENST00000525257 NBPF12Q5TAG4 269 aaPredicted RBP30.36■■■□□ 2.45
USP47-205ENST00000525257 C9orf78Q9NZ63 289 aaPredicted RBP30.36■■■□□ 2.45
USP47-205ENST00000525257 ZBTB48P10074 688 aaPredicted RBP30.35■■■□□ 2.45
USP47-205ENST00000525257 IFNL1Q8IU54 200 aa30.35■■■□□ 2.45
USP47-205ENST00000525257 LAMB1P07942 1786 aa30.35■■■□□ 2.45
USP47-205ENST00000525257 INHBEP58166 350 aa30.34■■■□□ 2.45
USP47-205ENST00000525257 SLC4A10Q6U841 1118 aa30.34■■■□□ 2.45
USP47-205ENST00000525257 FAM205AQ6ZU69 1335 aa30.32■■■□□ 2.44
USP47-205ENST00000525257 IGF2BP3O00425 579 aaKnown RBP eCLIP30.32■■■□□ 2.44
USP47-205ENST00000525257 ANP32CO43423 234 aa30.32■■■□□ 2.44
USP47-205ENST00000525257 RASA3Q14644 834 aa30.32■■■□□ 2.44
USP47-205ENST00000525257 ALDH1L1O75891 902 aa30.31■■■□□ 2.44
USP47-205ENST00000525257 GYG1P46976 350 aa30.31■■■□□ 2.44
USP47-205ENST00000525257 IREB2P48200 963 aaKnown RBP30.31■■■□□ 2.44
USP47-205ENST00000525257 MFSD14BQ5SR56 506 aa30.31■■■□□ 2.44
USP47-205ENST00000525257 SRCIN1Q9C0H9 1055 aa30.31■■■□□ 2.44
USP47-205ENST00000525257 ARAP2Q8WZ64 1704 aa30.3■■■□□ 2.44
USP47-205ENST00000525257 USP2O75604 605 aaPredicted RBP30.3■■■□□ 2.44
USP47-205ENST00000525257 TDRD7Q8NHU6 1098 aaKnown RBP30.3■■■□□ 2.44
USP47-205ENST00000525257 PUS3Q9BZE2 481 aaKnown RBP30.3■■■□□ 2.44
USP47-205ENST00000525257 TTF2Q9UNY4 1162 aaKnown RBP30.3■■■□□ 2.44
USP47-205ENST00000525257 OTOFQ9HC10 1997 aa30.3■■■□□ 2.44
USP47-205ENST00000525257 UNCXA6NJT0 531 aa30.29■■■□□ 2.44
USP47-205ENST00000525257 GJA5P36382 358 aa30.29■■■□□ 2.44
USP47-205ENST00000525257 UBE4AQ14139 1066 aa30.29■■■□□ 2.44
USP47-205ENST00000525257 PRPF38BQ5VTL8 546 aaKnown RBP30.29■■■□□ 2.44
USP47-205ENST00000525257 SUCLG2Q96I99 432 aa30.29■■■□□ 2.44
USP47-205ENST00000525257 HIBADHP31937 336 aaKnown RBP30.28■■■□□ 2.44
USP47-205ENST00000525257 ZNF70Q9UC06 446 aaPredicted RBP30.28■■■□□ 2.44
USP47-205ENST00000525257 TRIM17Q9Y577 477 aa30.28■■■□□ 2.44
USP47-205ENST00000525257 HTTP42858 3142 aa30.28■■■□□ 2.44
USP47-205ENST00000525257 SPDYE2Q495Y8 402 aa30.27■■■□□ 2.44
USP47-205ENST00000525257 ANKRD13AQ8IZ07 590 aa30.27■■■□□ 2.44
USP47-205ENST00000525257 FAM84BQ96KN1 310 aaPredicted RBP30.27■■■□□ 2.44
USP47-205ENST00000525257 TDRD3Q9H7E2 651 aaKnown RBP30.27■■■□□ 2.44
USP47-205ENST00000525257 SERPINA10Q9UK55 444 aa30.27■■■□□ 2.44
USP47-205ENST00000525257 TNFAIP1Q13829 316 aa30.26■■■□□ 2.43
USP47-205ENST00000525257 KAZALD1Q96I82 304 aa30.26■■■□□ 2.43
USP47-205ENST00000525257 OTOP1Q7RTM1 612 aa30.25■■■□□ 2.43
USP47-205ENST00000525257 ELP3Q9H9T3 547 aa30.25■■■□□ 2.43
USP47-205ENST00000525257 NBPF7P0C2Y1 421 aaPredicted RBP30.24■■■□□ 2.43
USP47-205ENST00000525257 CRHR2Q13324 411 aa30.24■■■□□ 2.43
USP47-205ENST00000525257 CDAN1Q8IWY9 1227 aa30.24■■■□□ 2.43
USP47-205ENST00000525257 OTUD7BQ6GQQ9 843 aa30.23■■■□□ 2.43
USP47-205ENST00000525257 DZIP1LQ8IYY4 767 aaKnown RBP30.23■■■□□ 2.43
USP47-205ENST00000525257 FAM9BQ8IZU0 186 aa30.23■■■□□ 2.43
USP47-205ENST00000525257 TCP10L2B9ZVM9 353 aa30.22■■■□□ 2.43
USP47-205ENST00000525257 CD99L2Q8TCZ2 262 aa30.22■■■□□ 2.43
USP47-205ENST00000525257 OPTNQ96CV9 577 aa30.22■■■□□ 2.43
USP47-205ENST00000525257 IQSEC3Q9UPP2 1182 aaPredicted RBP30.22■■■□□ 2.43
USP47-205ENST00000525257 RIPOR2Q9Y4F9 1068 aa30.22■■■□□ 2.43
USP47-205ENST00000525257 MROH5Q6ZUA9 1318 aa30.22■■■□□ 2.43
USP47-205ENST00000525257 CRKP46108 304 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms