RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 PCDHAC2Q9Y5I4 1007 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
SMCO4-202ENST00000525141 RFX5P48382 616 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-202ENST00000525141 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
SMCO4-202ENST00000525141 TNS4Q8IZW8 715 aa15.79■□□□□ 0.12
SMCO4-202ENST00000525141 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 PITPNM2Q9BZ72 1349 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 SASH1O94885 1247 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 GYG1P46976 350 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
SMCO4-202ENST00000525141 UBE4AQ14139 1066 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 MOB2Q70IA6 237 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
SMCO4-202ENST00000525141 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
SMCO4-202ENST00000525141 AOX1Q06278 1338 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 RGMBQ6NW40 437 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 OGFOD1Q8N543 542 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 VGLL2Q8N8G2 317 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 AIDAQ96BJ3 306 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
SMCO4-202ENST00000525141 MMP14P50281 582 aa15.76■□□□□ 0.11
SMCO4-202ENST00000525141 FKBP1AP62942 108 aaKnown RBP15.76■□□□□ 0.11
SMCO4-202ENST00000525141 FBXO33Q7Z6M2 555 aa15.76■□□□□ 0.11
SMCO4-202ENST00000525141 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
SMCO4-202ENST00000525141 FAM205AQ6ZU69 1335 aa15.75■□□□□ 0.11
SMCO4-202ENST00000525141 HIBADHP31937 336 aaKnown RBP15.75■□□□□ 0.11
SMCO4-202ENST00000525141 ZNF804AQ7Z570 1209 aa15.75■□□□□ 0.11
SMCO4-202ENST00000525141 MTMR14Q8NCE2 650 aa15.75■□□□□ 0.11
SMCO4-202ENST00000525141 PRMT6Q96LA8 375 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-202ENST00000525141 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
SMCO4-202ENST00000525141 MROH5Q6ZUA9 1318 aa15.74■□□□□ 0.11
SMCO4-202ENST00000525141 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
SMCO4-202ENST00000525141 PDE8BO95263 885 aa15.74■□□□□ 0.11
SMCO4-202ENST00000525141 ZNF157P51786 506 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-202ENST00000525141 KIF23Q02241 960 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-202ENST00000525141 PTPN12Q05209 780 aaKnown RBP15.74■□□□□ 0.11
SMCO4-202ENST00000525141 GRIK5Q16478 980 aa15.74■□□□□ 0.11
SMCO4-202ENST00000525141 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
SMCO4-202ENST00000525141 FGFR2P21802 821 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 CSRNP1Q96S65 589 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 HDAC9Q9UKV0 1011 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
SMCO4-202ENST00000525141 BCAR3O75815 825 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 BCAMP50895 628 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 NOGQ13253 232 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 CFAP100Q494V2 611 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 ARHGAP45Q92619 1136 aa15.72■□□□□ 0.11
SMCO4-202ENST00000525141 EYA2O00167 538 aa15.71■□□□□ 0.11
SMCO4-202ENST00000525141 SLC10A3P09131 477 aa15.71■□□□□ 0.11
SMCO4-202ENST00000525141 FKBP1BP68106 108 aa15.71■□□□□ 0.11
SMCO4-202ENST00000525141 METTL24Q5JXM2 366 aa15.71■□□□□ 0.11
SMCO4-202ENST00000525141 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
SMCO4-202ENST00000525141 API5Q9BZZ5 524 aaKnown RBP15.71■□□□□ 0.11
SMCO4-202ENST00000525141 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
SMCO4-202ENST00000525141 IQSEC3Q9UPP2 1182 aaPredicted RBP15.71■□□□□ 0.11
SMCO4-202ENST00000525141 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
SMCO4-202ENST00000525141 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
SMCO4-202ENST00000525141 RASAL3Q86YV0 1011 aa15.7■□□□□ 0.1
SMCO4-202ENST00000525141 DEFB129Q9H1M3 183 aa15.7■□□□□ 0.1
SMCO4-202ENST00000525141 MFSD14BQ5SR56 506 aa15.69■□□□□ 0.1
SMCO4-202ENST00000525141 LDLRAD1Q5T700 205 aa15.69■□□□□ 0.1
SMCO4-202ENST00000525141 MEIS3Q99687 375 aa15.69■□□□□ 0.1
SMCO4-202ENST00000525141 BEGAINQ9BUH8 593 aa15.69■□□□□ 0.1
SMCO4-202ENST00000525141 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
SMCO4-202ENST00000525141 CASP8AP2Q9UKL3 1982 aa15.69■□□□□ 0.1
SMCO4-202ENST00000525141 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
SMCO4-202ENST00000525141 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
SMCO4-202ENST00000525141 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-202ENST00000525141 PRKG1Q13976 671 aa15.68■□□□□ 0.1
SMCO4-202ENST00000525141 RNF186Q9NXI6 227 aa15.68■□□□□ 0.1
SMCO4-202ENST00000525141 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
SMCO4-202ENST00000525141 APOBEC3FQ8IUX4 373 aaKnown RBP15.67■□□□□ 0.1
SMCO4-202ENST00000525141 TTF2Q9UNY4 1162 aaKnown RBP15.67■□□□□ 0.1
SMCO4-202ENST00000525141 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
SMCO4-202ENST00000525141 CA12O43570 354 aa15.66■□□□□ 0.1
SMCO4-202ENST00000525141 TRIM27P14373 513 aa15.66■□□□□ 0.1
SMCO4-202ENST00000525141 NBPF12Q5TAG4 269 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-202ENST00000525141 SIL1Q9H173 461 aa15.66■□□□□ 0.1
SMCO4-202ENST00000525141 TDRD3Q9H7E2 651 aaKnown RBP15.66■□□□□ 0.1
SMCO4-202ENST00000525141 ZNF70Q9UC06 446 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-202ENST00000525141 SERPINA10Q9UK55 444 aa15.66■□□□□ 0.1
SMCO4-202ENST00000525141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-202ENST00000525141 PAPPA2Q9BXP8 1791 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 USP2O75604 605 aaPredicted RBP15.65■□□□□ 0.1
SMCO4-202ENST00000525141 TRPA1O75762 1119 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 CIAO1O76071 339 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 CRKP46108 304 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
SMCO4-202ENST00000525141 PUM3Q15397 648 aaKnown RBP15.65■□□□□ 0.1
SMCO4-202ENST00000525141 CAVIN4Q5BKX8 364 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
SMCO4-202ENST00000525141 MRIQ9BWK5 157 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 COPRSQ9NQ92 184 aa15.65■□□□□ 0.1
SMCO4-202ENST00000525141 TM4SF4P48230 202 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms