RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
TRAPPC4-205ENST00000525079 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
TRAPPC4-205ENST00000525079 TLL2Q9Y6L7 1015 aa16.03■□□□□ 0.16
TRAPPC4-205ENST00000525079 WNT10BO00744 389 aa16.02■□□□□ 0.16
TRAPPC4-205ENST00000525079 CYP4F22Q6NT55 531 aa16.02■□□□□ 0.16
TRAPPC4-205ENST00000525079 FBXO33Q7Z6M2 555 aa16.02■□□□□ 0.16
TRAPPC4-205ENST00000525079 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 FGFR2P21802 821 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 BCAMP50895 628 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 CAVIN4Q5BKX8 364 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 SAPCD2Q86UD0 394 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 CDCA5Q96FF9 252 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 PCDHAC2Q9Y5I4 1007 aa16.01■□□□□ 0.15
TRAPPC4-205ENST00000525079 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 FRAT2O75474 233 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-205ENST00000525079 CIAO1O76071 339 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 GNAI2P04899 355 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 IFIT1P09914 478 aaKnown RBP16■□□□□ 0.15
TRAPPC4-205ENST00000525079 RLBP1P12271 317 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 MFSD14BQ5SR56 506 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
TRAPPC4-205ENST00000525079 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
TRAPPC4-205ENST00000525079 CAPNS2Q96L46 248 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
TRAPPC4-205ENST00000525079 SLC5A1P13866 664 aa15.99■□□□□ 0.15
TRAPPC4-205ENST00000525079 FKBP1AP62942 108 aaKnown RBP15.99■□□□□ 0.15
TRAPPC4-205ENST00000525079 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
TRAPPC4-205ENST00000525079 GBA2Q9HCG7 927 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC4-205ENST00000525079 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
TRAPPC4-205ENST00000525079 PITPNM2Q9BZ72 1349 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 AOC2O75106 756 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 IL15P40933 162 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 MMP14P50281 582 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 RBM5P52756 815 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 HUNKP57058 714 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 GRIK5Q16478 980 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 ATP2B3Q16720 1220 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 CFAP100Q494V2 611 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 C2orf69Q8N8R5 385 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 LPIN2Q92539 896 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 ZBED3Q96IU2 234 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
TRAPPC4-205ENST00000525079 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 ECE1P42892 770 aa15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 MTX1Q13505 466 aa15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 PRMT6Q96LA8 375 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 TTF2Q9UNY4 1162 aaKnown RBP15.97■□□□□ 0.15
TRAPPC4-205ENST00000525079 AOX1Q06278 1338 aa15.96■□□□□ 0.15
TRAPPC4-205ENST00000525079 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
TRAPPC4-205ENST00000525079 ADORA1P30542 326 aa15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 TIMM10P62072 90 aa15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 TFCP2Q12800 502 aa15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 MOB2Q70IA6 237 aa15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 MTMR14Q8NCE2 650 aa15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC4-205ENST00000525079 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
TRAPPC4-205ENST00000525079 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC4-205ENST00000525079 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
TRAPPC4-205ENST00000525079 HHIPL1Q96JK4 782 aa15.94■□□□□ 0.14
TRAPPC4-205ENST00000525079 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
TRAPPC4-205ENST00000525079 FOXN1O15353 648 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 MYO1BO43795 1136 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 PHKA1P46020 1223 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 CRKP46108 304 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 PRKG1Q13976 671 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 APOBEC3FQ8IUX4 373 aaKnown RBP15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 TBC1D22AQ8WUA7 517 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 ARAP2Q8WZ64 1704 aa15.93■□□□□ 0.14
TRAPPC4-205ENST00000525079 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 ZNF157P51786 506 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 ATP8B2P98198 1209 aa15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 TTLL12Q14166 644 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 COL13A1Q5TAT6 717 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 AIDAQ96BJ3 306 aa15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 ZIC5Q96T25 663 aa15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 TDRD3Q9H7E2 651 aaKnown RBP15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 MYH13Q9UKX3 1938 aa15.92■□□□□ 0.14
TRAPPC4-205ENST00000525079 ECM29Q5VYK3 1845 aa15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 COL1A1P02452 1464 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 A0A1B0GUL7 405 aa15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 MAP2K1Q02750 393 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 CCDC102BQ68D86 513 aa15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 DEFB129Q9H1M3 183 aa15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 GNL3LQ9NVN8 582 aaKnown RBP15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 ZNF70Q9UC06 446 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-205ENST00000525079 SERPINA10Q9UK55 444 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms