RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
PVT1-216ENST00000523068 AKAP11Q9UKA4 1901 aa13.66□□□□□ -0.22
PVT1-216ENST00000523068 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
PVT1-216ENST00000523068 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 CA12O43570 354 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 SASH1O94885 1247 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
PVT1-216ENST00000523068 NF2P35240 595 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 LBX1P52954 281 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 METTL24Q5JXM2 366 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 VPS37DQ86XT2 251 aa13.65□□□□□ -0.22
PVT1-216ENST00000523068 APOBEC3FQ8IUX4 373 aaKnown RBP13.65□□□□□ -0.22
PVT1-216ENST00000523068 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
PVT1-216ENST00000523068 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
PVT1-216ENST00000523068 ZNF157P51786 506 aaPredicted RBP13.64□□□□□ -0.23
PVT1-216ENST00000523068 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
PVT1-216ENST00000523068 DLGAP5Q15398 846 aa13.64□□□□□ -0.23
PVT1-216ENST00000523068 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
PVT1-216ENST00000523068 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
PVT1-216ENST00000523068 FAM84BQ96KN1 310 aaPredicted RBP13.64□□□□□ -0.23
PVT1-216ENST00000523068 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
PVT1-216ENST00000523068 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
PVT1-216ENST00000523068 MYO1BO43795 1136 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 PDE8BO95263 885 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 GYG1P46976 350 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 LRRC24Q50LG9 513 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 CAVIN4Q5BKX8 364 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 CERS5Q8N5B7 392 aa13.63□□□□□ -0.23
PVT1-216ENST00000523068 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
PVT1-216ENST00000523068 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
PVT1-216ENST00000523068 FAM155AB1AL88 458 aaPredicted RBP13.62□□□□□ -0.23
PVT1-216ENST00000523068 F8W031 263 aaPredicted RBP13.62□□□□□ -0.23
PVT1-216ENST00000523068 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
PVT1-216ENST00000523068 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
PVT1-216ENST00000523068 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
PVT1-216ENST00000523068 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
PVT1-216ENST00000523068 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
PVT1-216ENST00000523068 SLC10A3P09131 477 aa13.61□□□□□ -0.23
PVT1-216ENST00000523068 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
PVT1-216ENST00000523068 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
PVT1-216ENST00000523068 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
PVT1-216ENST00000523068 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
PVT1-216ENST00000523068 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
PVT1-216ENST00000523068 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
PVT1-216ENST00000523068 SCAF8Q9UPN6 1271 aaKnown RBP13.61□□□□□ -0.23
PVT1-216ENST00000523068 JAG2Q9Y219 1238 aa13.61□□□□□ -0.23
PVT1-216ENST00000523068 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 EYA2O00167 538 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
PVT1-216ENST00000523068 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
PVT1-216ENST00000523068 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
PVT1-216ENST00000523068 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
PVT1-216ENST00000523068 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 TBC1D22AQ8WUA7 517 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
PVT1-216ENST00000523068 GNAI3P08754 354 aa13.59□□□□□ -0.23
PVT1-216ENST00000523068 SLC5A1P13866 664 aa13.59□□□□□ -0.23
PVT1-216ENST00000523068 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 21.2
PVT1-216ENST00000523068 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
PVT1-216ENST00000523068 ARMC9Q7Z3E5 817 aa13.59□□□□□ -0.23
PVT1-216ENST00000523068 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
PVT1-216ENST00000523068 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
PVT1-216ENST00000523068 TTF2Q9UNY4 1162 aaKnown RBP13.59□□□□□ -0.23
PVT1-216ENST00000523068 CIAO1O76071 339 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
PVT1-216ENST00000523068 KIF23Q02241 960 aaPredicted RBP13.58□□□□□ -0.24
PVT1-216ENST00000523068 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 LPIN2Q92539 896 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
PVT1-216ENST00000523068 ZIC5Q96T25 663 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
PVT1-216ENST00000523068 CASP8AP2Q9UKL3 1982 aa13.58□□□□□ -0.24
PVT1-216ENST00000523068 CLRN2A0PK11 232 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 CAPN15O75808 1086 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 FGFR2P21802 821 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
PVT1-216ENST00000523068 TNFAIP1Q13829 316 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
PVT1-216ENST00000523068 MEIS3Q99687 375 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 SIL1Q9H173 461 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 VEZTQ9HBM0 779 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 CEP126Q9P2H0 1117 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
PVT1-216ENST00000523068 IQSEC3Q9UPP2 1182 aaPredicted RBP13.57□□□□□ -0.24
PVT1-216ENST00000523068 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
PVT1-216ENST00000523068 TRIM27P14373 513 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
PVT1-216ENST00000523068 BCAMP50895 628 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
PVT1-216ENST00000523068 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 COPRSQ9NQ92 184 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
PVT1-216ENST00000523068 PCDHAC2Q9Y5I4 1007 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms