RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NBPF6Q5VWK0 638 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 CYP2U1Q7Z449 544 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 NBPF4Q96M43 638 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 AGBL1Q96MI9 1066 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 TSEN34Q9BSV6 310 aaKnown RBP8.99□□□□□ -0.97
VPS13B-211ENST00000522802 ATP13A2Q9NQ11 1180 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 CYP27B1O15528 508 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 GNRH1P01148 92 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 PTGIRP43119 386 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 GTF2IP78347 998 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 CLDN10P78369 228 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 ITPK1Q13572 414 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 SLC12A5Q9H2X9 1139 aa8.98□□□□□ -0.97
VPS13B-211ENST00000522802 SMG6Q86US8 1419 aaKnown RBP8.97□□□□□ -0.97
VPS13B-211ENST00000522802 KIF20BQ96Q89 1820 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 AMPHP49418 695 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 SIK1P57059 783 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 MRPL14Q6P1L8 145 aaKnown RBP8.97□□□□□ -0.97
VPS13B-211ENST00000522802 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 HDGFL2Q7Z4V5 671 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-211ENST00000522802 SMC1BQ8NDV3 1235 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 RAPGEF4Q8WZA2 1011 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 PIGBQ92521 554 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 ARID3AQ99856 593 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 RNF181Q9P0P0 153 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 CGNL1Q0VF96 1302 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 KDM2BQ8NHM5 1336 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 ZNF831Q5JPB2 1677 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 KDRP35968 1356 aa8.97□□□□□ -0.97
VPS13B-211ENST00000522802 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.96□□□□□ -0.98
VPS13B-211ENST00000522802 KCNA3P22001 575 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 ATP1A2P50993 1020 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 TGFB2P61812 414 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.98
VPS13B-211ENST00000522802 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 SMARCC1Q92922 1105 aaPredicted RBP8.96□□□□□ -0.98
VPS13B-211ENST00000522802 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
VPS13B-211ENST00000522802 DLEC1Q9Y238 1755 aa8.96□□□□□ -0.98
VPS13B-211ENST00000522802 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
VPS13B-211ENST00000522802 SPINT1O43278 529 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 DKK1O94907 266 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 UPP2O95045 317 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 BMP1P13497 986 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
VPS13B-211ENST00000522802 RASA1P20936 1047 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 RELBQ01201 579 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
VPS13B-211ENST00000522802 ZNF395Q9H8N7 513 aaPredicted RBP8.95□□□□□ -0.98
VPS13B-211ENST00000522802 MYH14Q7Z406 1995 aaKnown RBP8.95□□□□□ -0.98
VPS13B-211ENST00000522802 KDM6AO15550 1401 aaPredicted RBP8.95□□□□□ -0.98
VPS13B-211ENST00000522802 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 SCNN1DP51172 638 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 RASSF7Q02833 373 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 PTK7Q13308 1070 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 CRTC2Q53ET0 693 aaPredicted RBP8.94□□□□□ -0.98
VPS13B-211ENST00000522802 COG3Q96JB2 828 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 ETNK1Q9HBU6 452 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 TERF2IPQ9NYB0 399 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 ASAP1Q9ULH1 1129 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 KIAA1024Q9UPX6 916 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 NCAPD2Q15021 1401 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 ADAMTS7Q9UKP4 1686 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 CCDC88AQ3V6T2 1871 aa8.94□□□□□ -0.98
VPS13B-211ENST00000522802 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 STAU1O95793 577 aaKnown RBP8.93□□□□□ -0.98
VPS13B-211ENST00000522802 GYS1P13807 737 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 CLN3Q13286 438 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 SCARF1Q14162 830 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 SIX5Q8N196 739 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 ZFP42Q96MM3 310 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
VPS13B-211ENST00000522802 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 CCDC87Q9NVE4 849 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 TJP1Q07157 1748 aa8.93□□□□□ -0.98
VPS13B-211ENST00000522802 INSRP06213 1382 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 FOXN1O15353 648 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 ATG7O95352 703 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 INHAP05111 366 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 BMP2P12643 396 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 HMGB2P26583 209 aaKnown RBP8.92□□□□□ -0.98
VPS13B-211ENST00000522802 TMF1P82094 1093 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 HSP90AB2PQ58FF8 381 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 SENP2Q9HC62 589 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 HRH3Q9Y5N1 445 aa8.92□□□□□ -0.98
VPS13B-211ENST00000522802 AFDNP55196 1824 aaKnown RBP8.91□□□□□ -0.98
VPS13B-211ENST00000522802 FLT4P35916 1363 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms