RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 MOXD2PA6NHM9 499 aa10.61□□□□□ -0.71
PVT1-213ENST00000522414 ADH1CP00326 375 aa10.61□□□□□ -0.71
PVT1-213ENST00000522414 SUZ12Q15022 739 aaKnown RBP10.61□□□□□ -0.71
PVT1-213ENST00000522414 NBPF5PQ86XG9 351 aaPredicted RBP10.61□□□□□ -0.71
PVT1-213ENST00000522414 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
PVT1-213ENST00000522414 SBF1O95248 1867 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 SRGNP10124 158 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
PVT1-213ENST00000522414 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
PVT1-213ENST00000522414 LAMB4A4D0S4 1761 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
PVT1-213ENST00000522414 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 DLG5Q8TDM6 1919 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 NEFMP07197 916 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 VEGFAP15692 232 aaPredicted RBP10.59□□□□□ -0.71
PVT1-213ENST00000522414 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
PVT1-213ENST00000522414 ST5P78524 1137 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 NFE2L2Q16236 605 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 STYK1Q6J9G0 422 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 OLFM4Q6UX06 510 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 MASTLQ96GX5 879 aa10.59□□□□□ -0.71
PVT1-213ENST00000522414 MYL6BP14649 208 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 FSTL1Q12841 308 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
PVT1-213ENST00000522414 ERFEQ4G0M1 354 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 PRPF40BQ6NWY9 871 aaKnown RBP10.58□□□□□ -0.72
PVT1-213ENST00000522414 TTLL7Q6ZT98 887 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
PVT1-213ENST00000522414 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
PVT1-213ENST00000522414 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
PVT1-213ENST00000522414 SSTR3P32745 418 aaPredicted RBP10.57□□□□□ -0.72
PVT1-213ENST00000522414 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
PVT1-213ENST00000522414 DDNO94850 711 aaPredicted RBP10.56□□□□□ -0.72
PVT1-213ENST00000522414 NPR1P16066 1061 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 GPTP24298 496 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
PVT1-213ENST00000522414 RIPK4P57078 832 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 KCNMA1Q12791 1236 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
PVT1-213ENST00000522414 FOXJ1Q92949 421 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 SLX4Q8IY92 1834 aa10.56□□□□□ -0.72
PVT1-213ENST00000522414 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 NR3C2P08235 984 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 EIF2S2P20042 333 aaKnown RBP10.55□□□□□ -0.72
PVT1-213ENST00000522414 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
PVT1-213ENST00000522414 CDK15Q96Q40 435 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 PNNQ9H307 717 aaKnown RBP10.55□□□□□ -0.72
PVT1-213ENST00000522414 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
PVT1-213ENST00000522414 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
PVT1-213ENST00000522414 ERVV-1B6SEH8 477 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
PVT1-213ENST00000522414 ANXA1P04083 346 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 MTMR2Q13614 643 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 SUSD4Q5VX71 490 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 CCDC146Q8IYE0 955 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 KLRG1Q96E93 195 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 ZNF277Q9NRM2 450 aaPredicted RBP10.54□□□□□ -0.72
PVT1-213ENST00000522414 TSPYL4Q9UJ04 414 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 MAP3K15Q6ZN16 1313 aa10.54□□□□□ -0.72
PVT1-213ENST00000522414 TNRC6CQ9HCJ0 1690 aaKnown RBP10.53□□□□□ -0.72
PVT1-213ENST00000522414 FER1L6Q2WGJ9 1857 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
PVT1-213ENST00000522414 MAN1A2O60476 641 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
PVT1-213ENST00000522414 RALBP1Q15311 655 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 PROSER3Q2NL68 480 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 SLC51AQ86UW1 340 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 LTBP3Q9NS15 1303 aa10.53□□□□□ -0.72
PVT1-213ENST00000522414 ALDH1B1P30837 517 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 CCDC93Q567U6 631 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 KIF6Q6ZMV9 814 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 ZNF34Q8IZ26 560 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 ZNF428Q96B54 188 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.73
PVT1-213ENST00000522414 TIAM2Q8IVF5 1701 aa10.52□□□□□ -0.73
PVT1-213ENST00000522414 CTHP32929 405 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 GRM5P41594 1212 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
PVT1-213ENST00000522414 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 KRT24Q2M2I5 525 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 LYPD8Q6UX82 237 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms