RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
LAMA4-219ENST00000522006 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 TUBB4BP68371 445 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-219ENST00000522006 GRM8O00222 908 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 KRT79Q5XKE5 535 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 SAMD15Q9P1V8 674 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 UBLCP1Q8WVY7 318 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-219ENST00000522006 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
LAMA4-219ENST00000522006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
LAMA4-219ENST00000522006 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
LAMA4-219ENST00000522006 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 ACEP12821 1306 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 RUFY3Q7L099 469 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 PA2G4Q9UQ80 394 aaKnown RBP12.86□□□□□ -0.35
LAMA4-219ENST00000522006 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 CA8P35219 290 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-219ENST00000522006 HDXQ7Z353 690 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 MTRF1LQ9UGC7 380 aaKnown RBP12.86□□□□□ -0.35
LAMA4-219ENST00000522006 VAV2P52735 878 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 TRAF1Q13077 416 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 RNF113AO15541 343 aaKnown RBP12.86□□□□□ -0.35
LAMA4-219ENST00000522006 TNNC1P63316 161 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 CALML3P27482 149 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 PLIN2Q99541 437 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
LAMA4-219ENST00000522006 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 TTC41PQ6P2S7 1318 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 ATP2A2P16615 1042 aaKnown RBP12.85□□□□□ -0.35
LAMA4-219ENST00000522006 FBLN1P23142 703 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 PLS1Q14651 629 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 FBXO31Q5XUX0 539 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-219ENST00000522006 OGFRQ9NZT2 677 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 TPD52P55327 224 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-219ENST00000522006 SETDB1Q15047 1291 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 NOL3O60936 208 aaKnown RBP12.85□□□□□ -0.35
LAMA4-219ENST00000522006 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
LAMA4-219ENST00000522006 SPDYE3A6NKU9 549 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 GNAT2P19087 354 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 TNNI2P48788 182 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 CEP83Q9Y592 693 aa12.85□□□□□ -0.35
LAMA4-219ENST00000522006 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 SMC5Q8IY18 1101 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 SEL1L2Q5TEA6 688 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-219ENST00000522006 LUC7L2Q9Y383 392 aaKnown RBP12.84□□□□□ -0.35
LAMA4-219ENST00000522006 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 RAPGEF1Q13905 1077 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 AKR1B15C9JRZ8 316 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-219ENST00000522006 RXRAP19793 462 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 ZNF804AQ7Z570 1209 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 TCHPQ9BT92 498 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 TXNDC16Q9P2K2 825 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 DCAF17Q5H9S7 520 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-219ENST00000522006 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 CNGA4Q8IV77 575 aa12.84□□□□□ -0.35
LAMA4-219ENST00000522006 CFAP58Q5T655 872 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 DTHD1Q6ZMT9 781 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 NGLY1Q96IV0 654 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
LAMA4-219ENST00000522006 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
LAMA4-219ENST00000522006 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-219ENST00000522006 ZBTB21Q9ULJ3 1066 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 ELP1O95163 1332 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 KRBA2Q6ZNG9 492 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 MTUS1Q9ULD2 1270 aa12.83□□□□□ -0.36
LAMA4-219ENST00000522006 IGSF3O75054 1194 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 ZWINTO95229 277 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 CALCOCO2Q13137 446 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 FAM169AQ9Y6X4 670 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
LAMA4-219ENST00000522006 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms