RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
CLK4-209ENST00000521621 HMMRO75330 724 aa11.72□□□□□ -0.53
CLK4-209ENST00000521621 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
CLK4-209ENST00000521621 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLK4-209ENST00000521621 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
CLK4-209ENST00000521621 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
CLK4-209ENST00000521621 MAST3O60307 1309 aa11.71□□□□□ -0.53
CLK4-209ENST00000521621 HHIPL1Q96JK4 782 aa11.71□□□□□ -0.53
CLK4-209ENST00000521621 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.53
CLK4-209ENST00000521621 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
CLK4-209ENST00000521621 RAB11FIP3O75154 756 aa11.71□□□□□ -0.54
CLK4-209ENST00000521621 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.54
CLK4-209ENST00000521621 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.54
CLK4-209ENST00000521621 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.54
CLK4-209ENST00000521621 PPP2R3BQ9Y5P8 575 aa11.71□□□□□ -0.54
CLK4-209ENST00000521621 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
CLK4-209ENST00000521621 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
CLK4-209ENST00000521621 GTF2IP78347 998 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 CDC37L1Q7L3B6 337 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 OGFOD1Q8N543 542 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 CERS5Q8N5B7 392 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 TRPM4Q8TD43 1214 aa11.7□□□□□ -0.54
CLK4-209ENST00000521621 PA2G4Q9UQ80 394 aaKnown RBP11.7□□□□□ -0.54
CLK4-209ENST00000521621 GYG1P46976 350 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
CLK4-209ENST00000521621 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 UNCXA6NJT0 531 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 PLIN1O60240 522 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
CLK4-209ENST00000521621 TFCP2Q12800 502 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
CLK4-209ENST00000521621 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 SNAP23O00161 211 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 UQCRFS1P1P0C7P4 283 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLK4-209ENST00000521621 FKBP1BP68106 108 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 SIRT2Q8IXJ6 389 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
CLK4-209ENST00000521621 BCAMP50895 628 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
CLK4-209ENST00000521621 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
CLK4-209ENST00000521621 SIL1Q9H173 461 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
CLK4-209ENST00000521621 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
CLK4-209ENST00000521621 TMEM88BA6NKF7 163 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 SCARF1Q14162 830 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 MFSD14BQ5SR56 506 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 DNAJC5GQ8N7S2 189 aa11.67□□□□□ -0.54
CLK4-209ENST00000521621 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
CLK4-209ENST00000521621 UTRNP46939 3433 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 WNT10BO00744 389 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
CLK4-209ENST00000521621 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
CLK4-209ENST00000521621 SHTN1A0MZ66 631 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
CLK4-209ENST00000521621 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 KIF1BPQ96EK5 621 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
CLK4-209ENST00000521621 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
CLK4-209ENST00000521621 CNTNAP1P78357 1384 aa11.65□□□□□ -0.54
CLK4-209ENST00000521621 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
CLK4-209ENST00000521621 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
CLK4-209ENST00000521621 C1orf115Q9H7X2 142 aa11.65□□□□□ -0.54
CLK4-209ENST00000521621 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
CLK4-209ENST00000521621 GAKO14976 1311 aa11.65□□□□□ -0.55
CLK4-209ENST00000521621 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
CLK4-209ENST00000521621 EGFRP00533 1210 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 PHKA1P46020 1223 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 DLGAP5Q15398 846 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
CLK4-209ENST00000521621 CFAP100Q494V2 611 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
CLK4-209ENST00000521621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.64□□□□□ -0.55
CLK4-209ENST00000521621 MYO1BO43795 1136 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 ADORA1P30542 326 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 TIMM10P62072 90 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
CLK4-209ENST00000521621 KLRG1Q96E93 195 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 MXD3Q9BW11 206 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
CLK4-209ENST00000521621 RFX7Q2KHR2 1363 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms