RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PPM1HQ9ULR3 514 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 K7ELQ4 463 aaPredicted RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 FURINP09958 794 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 RARAP10276 462 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 ADH6P28332 368 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 NRLP54845 237 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 PCBP4P57723 403 aaKnown RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 FAAP100Q0VG06 881 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 XP32Q5T750 250 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 DHX32Q7L7V1 743 aaKnown RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 DPH6Q7L8W6 267 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 CD163Q86VB7 1156 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 TMEM102Q8N9M5 508 aaPredicted RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 EAF1Q96JC9 268 aaPredicted RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 OSMRQ99650 979 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 TANGO6Q9C0B7 1094 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 EHD4Q9H223 541 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 LIN7BQ9HAP6 207 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 AVENQ9NQS1 362 aaPredicted RBP5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 TRAK1Q9UPV9 953 aa5.43□□□□□ -1.54
HMGN1P28-201ENST00000521340 METTL12A8MUP2 240 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 ENC1O14682 589 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 XRCC5P13010 732 aaKnown RBP5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 CHRNA4P43681 627 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 FCGRTP55899 365 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 ZNF468Q5VIY5 522 aaPredicted RBP5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 GIMAP6Q6P9H5 292 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 SV2BQ7L1I2 683 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 TMEM74Q96NL1 305 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 LNPKQ9C0E8 428 aa5.42□□□□□ -1.54
HMGN1P28-201ENST00000521340 GPLD1P80108 840 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 PLAURQ03405 335 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 ARID5AQ03989 594 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 HYAL2Q12891 473 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 RASIP1Q5U651 963 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 FBXL19Q6PCT2 694 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 RAB44Q7Z6P3 723 aaPredicted RBP5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 FAM177A1Q8N128 213 aaPredicted RBP5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 TRIM11Q96F44 468 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 NECAB3Q96P71 396 aaPredicted RBP5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 POP1Q99575 1024 aaKnown RBP5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 SEC31BQ9NQW1 1179 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 INPP5FQ9Y2H2 1132 aa5.41□□□□□ -1.54
HMGN1P28-201ENST00000521340 LOC102724428A0A0B4J2F2 783 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 J3QW42 95 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 PAGE1O75459 146 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 PSAPP07602 524 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 CELA3AP09093 270 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 SIK1P57059 783 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 BHMTQ93088 406 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 GPRASP2Q96D09 838 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 PBX4Q9BYU1 374 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 PPP1R1BQ9UD71 204 aaPredicted RBP5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 PRR12Q9ULL5 1215 aa5.4□□□□□ -1.54
HMGN1P28-201ENST00000521340 A0A096LPE4 126 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 A0A1W2PPZ6 126 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 PIK3R2O00459 728 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 FBXO24O75426 580 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 TFE3P19532 575 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 ATP2B1P20020 1258 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 BMP6P22004 513 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 ITGB7P26010 798 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 DNAJA1P31689 397 aaKnown RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 EIF4A3P38919 411 aaKnown RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 SOX9P48436 509 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 RPS26P11Q5JNZ5 115 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 AGMOQ6ZNB7 445 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 SYT9Q86SS6 491 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZNF296Q8WUU4 475 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 SEC16BQ96JE7 1060 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 DNAJC2Q99543 621 aaKnown RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 PLVAPQ9BX97 442 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 NT5C1AQ9BXI3 368 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 MUC3BQ9H195 1237 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 RASSF4Q9H2L5 321 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZNF576Q9H609 170 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 NOP53Q9NZM5 478 aaKnown RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 TTF2Q9UNY4 1162 aaKnown RBP5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 TLR6Q9Y2C9 796 aa5.39□□□□□ -1.55
HMGN1P28-201ENST00000521340 ELOA3CA0A087WX78 387 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ELOA3DA6NLF2 546 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 F6X3S4 739 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 CRKP46108 304 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ATP11AP98196 1134 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 COL9A3Q14050 684 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 CCDC85BQ15834 202 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ZNF423Q2M1K9 1284 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ELOA3BQ3SY89 546 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ILDR2Q71H61 639 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 VN1R5Q7Z5H4 357 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 NCAPG2Q86XI2 1143 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 ELOA3Q8NG57 546 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 TNFRSF25Q93038 417 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 SPATA32Q96LK8 384 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 NSUN5Q96P11 429 aaKnown RBP5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 SPON2Q9BUD6 331 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 PIF1Q9H611 641 aa5.38□□□□□ -1.55
HMGN1P28-201ENST00000521340 DNAJB12Q9NXW2 375 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms