RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
EXTL3-208ENST00000520940 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
EXTL3-208ENST00000520940 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
EXTL3-208ENST00000520940 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
EXTL3-208ENST00000520940 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
EXTL3-208ENST00000520940 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
EXTL3-208ENST00000520940 SLC10A3P09131 477 aa13.22□□□□□ -0.29
EXTL3-208ENST00000520940 FKBP1AP62942 108 aaKnown RBP13.22□□□□□ -0.29
EXTL3-208ENST00000520940 APOBEC3FQ8IUX4 373 aaKnown RBP13.22□□□□□ -0.29
EXTL3-208ENST00000520940 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
EXTL3-208ENST00000520940 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
EXTL3-208ENST00000520940 PRAMEF18Q5VWM3 479 aa13.21□□□□□ -0.29
EXTL3-208ENST00000520940 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
EXTL3-208ENST00000520940 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
EXTL3-208ENST00000520940 JAG2Q9Y219 1238 aa13.21□□□□□ -0.29
EXTL3-208ENST00000520940 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
EXTL3-208ENST00000520940 NF2P35240 595 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 GYG1P46976 350 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 LRRC24Q50LG9 513 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 MOB2Q70IA6 237 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
EXTL3-208ENST00000520940 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 LAMB1P07942 1786 aa13.2□□□□□ -0.3
EXTL3-208ENST00000520940 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
EXTL3-208ENST00000520940 KIF23Q02241 960 aaPredicted RBP13.19□□□□□ -0.3
EXTL3-208ENST00000520940 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
EXTL3-208ENST00000520940 CFAP100Q494V2 611 aa13.19□□□□□ -0.3
EXTL3-208ENST00000520940 VGLL2Q8N8G2 317 aa13.19□□□□□ -0.3
EXTL3-208ENST00000520940 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
EXTL3-208ENST00000520940 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
EXTL3-208ENST00000520940 PCDHAC2Q9Y5I4 1007 aa13.19□□□□□ -0.3
EXTL3-208ENST00000520940 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 SAGE1Q9NXZ1 904 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
EXTL3-208ENST00000520940 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
EXTL3-208ENST00000520940 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
EXTL3-208ENST00000520940 MYO1BO43795 1136 aa13.17□□□□□ -0.3
EXTL3-208ENST00000520940 PDE8BO95263 885 aa13.17□□□□□ -0.3
EXTL3-208ENST00000520940 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
EXTL3-208ENST00000520940 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
EXTL3-208ENST00000520940 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
EXTL3-208ENST00000520940 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
EXTL3-208ENST00000520940 AOX1Q06278 1338 aa13.16□□□□□ -0.3
EXTL3-208ENST00000520940 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
EXTL3-208ENST00000520940 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
EXTL3-208ENST00000520940 FBXO33Q7Z6M2 555 aa13.16□□□□□ -0.3
EXTL3-208ENST00000520940 ABHD8Q96I13 439 aa13.16□□□□□ -0.3
EXTL3-208ENST00000520940 CSRNP1Q96S65 589 aa13.16□□□□□ -0.3
EXTL3-208ENST00000520940 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
EXTL3-208ENST00000520940 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 EYA2O00167 538 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 TRPA1O75762 1119 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 PRKG1Q13976 671 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 PUM3Q15397 648 aaKnown RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 RNF186Q9NXI6 227 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
EXTL3-208ENST00000520940 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
EXTL3-208ENST00000520940 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
EXTL3-208ENST00000520940 FGFR2P21802 821 aa13.14□□□□□ -0.31
EXTL3-208ENST00000520940 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
EXTL3-208ENST00000520940 ANGEL1Q9UNK9 670 aaKnown RBP13.14□□□□□ -0.31
EXTL3-208ENST00000520940 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
EXTL3-208ENST00000520940 SLC5A1P13866 664 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 CRKP46108 304 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 BCAMP50895 628 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
EXTL3-208ENST00000520940 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 MEIS3Q99687 375 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 MCOLN1Q9GZU1 580 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 FZD1Q9UP38 647 aa13.13□□□□□ -0.31
EXTL3-208ENST00000520940 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
EXTL3-208ENST00000520940 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
EXTL3-208ENST00000520940 CIAO1O76071 339 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 GRIK5Q16478 980 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 MAP3K11Q16584 847 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
EXTL3-208ENST00000520940 LPIN2Q92539 896 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 SIL1Q9H173 461 aa13.12□□□□□ -0.31
EXTL3-208ENST00000520940 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
EXTL3-208ENST00000520940 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms