RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 FBXO33Q7Z6M2 555 aa14.62□□□□□ -0.07
HPS4-218ENST00000519774 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
HPS4-218ENST00000519774 NEUROD6Q96NK8 337 aa14.62□□□□□ -0.07
HPS4-218ENST00000519774 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
HPS4-218ENST00000519774 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
HPS4-218ENST00000519774 TIMM10P62072 90 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 CHAF1AQ13111 956 aaPredicted RBP14.61□□□□□ -0.07
HPS4-218ENST00000519774 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 ERC1Q8IUD2 1116 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 MICALL2Q8IY33 904 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
HPS4-218ENST00000519774 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 CNOT7Q9UIV1 285 aaKnown RBP14.61□□□□□ -0.07
HPS4-218ENST00000519774 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
HPS4-218ENST00000519774 PHKA1P46020 1223 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 AGBL3Q8NEM8 1001 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 XAGE2Q96GT9 111 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
HPS4-218ENST00000519774 H7C1D1 291 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 POTEJP0CG39 1038 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 RHPN1Q8TCX5 695 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 DPF2Q92785 391 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 GPR108Q9NPR9 543 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 ADARB2Q9NS39 739 aaKnown RBP14.59□□□□□ -0.07
HPS4-218ENST00000519774 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
HPS4-218ENST00000519774 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
HPS4-218ENST00000519774 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
HPS4-218ENST00000519774 TOMM70O94826 608 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
HPS4-218ENST00000519774 CCDC102BQ68D86 513 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
HPS4-218ENST00000519774 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 TRPM4Q8TD43 1214 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 GMLQ99445 158 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
HPS4-218ENST00000519774 F8W031 263 aaPredicted RBP14.57□□□□□ -0.08
HPS4-218ENST00000519774 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 USP17L8P0C7I0 530 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 TBC1D10BQ4KMP7 808 aaPredicted RBP14.57□□□□□ -0.08
HPS4-218ENST00000519774 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 AACSQ86V21 672 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 DBNDD2Q9BQY9 259 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 CCDC8Q9H0W5 538 aaPredicted RBP14.57□□□□□ -0.08
HPS4-218ENST00000519774 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
HPS4-218ENST00000519774 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
HPS4-218ENST00000519774 AAMPQ13685 434 aa14.56□□□□□ -0.08
HPS4-218ENST00000519774 KIF4BQ2VIQ3 1234 aa14.56□□□□□ -0.08
HPS4-218ENST00000519774 USP50Q70EL3 339 aaPredicted RBP14.56□□□□□ -0.08
HPS4-218ENST00000519774 LDHDQ86WU2 507 aa14.56□□□□□ -0.08
HPS4-218ENST00000519774 RBM46Q8TBY0 533 aaKnown RBP14.56□□□□□ -0.08
HPS4-218ENST00000519774 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
HPS4-218ENST00000519774 EGFRP00533 1210 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
HPS4-218ENST00000519774 RASGRF1Q13972 1273 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 TTC39AQ5SRH9 613 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
HPS4-218ENST00000519774 OGFOD1Q8N543 542 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 SMC1BQ8NDV3 1235 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 DBNLQ9UJU6 430 aaKnown RBP14.55□□□□□ -0.08
HPS4-218ENST00000519774 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 DENND2AQ9ULE3 1009 aa14.55□□□□□ -0.08
HPS4-218ENST00000519774 SEMA3EO15041 775 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
HPS4-218ENST00000519774 HIRAP54198 1017 aaPredicted RBP14.54□□□□□ -0.08
HPS4-218ENST00000519774 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
HPS4-218ENST00000519774 GRIK5Q16478 980 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 WDR66Q8TBY9 1149 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 LRRCC1Q9C099 1032 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 MYOZ2Q9NPC6 264 aa14.54□□□□□ -0.08
HPS4-218ENST00000519774 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
HPS4-218ENST00000519774 IFIT2P09913 472 aaKnown RBP14.53□□□□□ -0.08
HPS4-218ENST00000519774 UQCRFS1P1P0C7P4 283 aa14.53□□□□□ -0.08
HPS4-218ENST00000519774 ARID4AP29374 1257 aaPredicted RBP14.53□□□□□ -0.08
HPS4-218ENST00000519774 C1QTNF8P60827 252 aa14.53□□□□□ -0.08
HPS4-218ENST00000519774 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
HPS4-218ENST00000519774 PI16Q6UXB8 463 aa14.53□□□□□ -0.08
HPS4-218ENST00000519774 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
HPS4-218ENST00000519774 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.09
HPS4-218ENST00000519774 SCARF1Q14162 830 aa14.52□□□□□ -0.09
HPS4-218ENST00000519774 HMG20BQ9P0W2 317 aa14.52□□□□□ -0.09
HPS4-218ENST00000519774 ASTN2O75129 1339 aaPredicted RBP14.51□□□□□ -0.09
HPS4-218ENST00000519774 MCAMP43121 646 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 FSTL1Q12841 308 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
HPS4-218ENST00000519774 SPATA5Q8NB90 893 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 GGA3Q9NZ52 723 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms