RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 USP44Q9H0E7 712 aa31.85■■■□□ 2.69
VEGFA-220ENST00000519767 SLC10A3P09131 477 aa31.84■■■□□ 2.69
VEGFA-220ENST00000519767 CERS5Q8N5B7 392 aa31.84■■■□□ 2.69
VEGFA-220ENST00000519767 PUS3Q9BZE2 481 aaKnown RBP31.84■■■□□ 2.69
VEGFA-220ENST00000519767 HIBADHP31937 336 aaKnown RBP31.83■■■□□ 2.69
VEGFA-220ENST00000519767 ANKRD44Q8N8A2 993 aa31.83■■■□□ 2.69
VEGFA-220ENST00000519767 SMC4Q9NTJ3 1288 aa31.83■■■□□ 2.69
VEGFA-220ENST00000519767 TSKSQ9UJT2 592 aa31.83■■■□□ 2.69
VEGFA-220ENST00000519767 SCAF8Q9UPN6 1271 aaKnown RBP31.83■■■□□ 2.69
VEGFA-220ENST00000519767 PRAMEF18Q5VWM3 479 aa31.82■■■□□ 2.68
VEGFA-220ENST00000519767 TDRD7Q8NHU6 1098 aaKnown RBP31.81■■■□□ 2.68
VEGFA-220ENST00000519767 SAGE1Q9NXZ1 904 aa31.81■■■□□ 2.68
VEGFA-220ENST00000519767 FAM205AQ6ZU69 1335 aa31.8■■■□□ 2.68
VEGFA-220ENST00000519767 FAM84BQ96KN1 310 aaPredicted RBP31.8■■■□□ 2.68
VEGFA-220ENST00000519767 MYO1BO43795 1136 aa31.79■■■□□ 2.68
VEGFA-220ENST00000519767 TTLL12Q14166 644 aaPredicted RBP31.79■■■□□ 2.68
VEGFA-220ENST00000519767 UBE2Q2LH0YL09 131 aa31.78■■■□□ 2.68
VEGFA-220ENST00000519767 CSRNP1Q96S65 589 aa31.78■■■□□ 2.68
VEGFA-220ENST00000519767 ZNF646O15015 1829 aaPredicted RBP31.77■■■□□ 2.68
VEGFA-220ENST00000519767 GYG1P46976 350 aa31.77■■■□□ 2.68
VEGFA-220ENST00000519767 RASAL3Q86YV0 1011 aa31.77■■■□□ 2.68
VEGFA-220ENST00000519767 F8W031 263 aaPredicted RBP31.76■■■□□ 2.67
VEGFA-220ENST00000519767 CFAP100Q494V2 611 aa31.76■■■□□ 2.67
VEGFA-220ENST00000519767 METTL24Q5JXM2 366 aa31.76■■■□□ 2.67
VEGFA-220ENST00000519767 MOB2Q70IA6 237 aa31.76■■■□□ 2.67
VEGFA-220ENST00000519767 VPS37DQ86XT2 251 aa31.76■■■□□ 2.67
VEGFA-220ENST00000519767 DEFB129Q9H1M3 183 aa31.76■■■□□ 2.67
VEGFA-220ENST00000519767 PDE8BO95263 885 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 LRRC24Q50LG9 513 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 CAVIN4Q5BKX8 364 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 ARMC9Q7Z3E5 817 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 FBXO33Q7Z6M2 555 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 ABHD8Q96I13 439 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 RNF186Q9NXI6 227 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 HDAC5Q9UQL6 1122 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 PPP2R3BQ9Y5P8 575 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 PAPPA2Q9BXP8 1791 aa31.75■■■□□ 2.67
VEGFA-220ENST00000519767 SPDYE2BA6NHP3 402 aa31.74■■■□□ 2.67
VEGFA-220ENST00000519767 SPDYE6P0CI01 402 aa31.74■■■□□ 2.67
VEGFA-220ENST00000519767 MFSD14BQ5SR56 506 aa31.74■■■□□ 2.67
VEGFA-220ENST00000519767 API5Q9BZZ5 524 aaKnown RBP31.74■■■□□ 2.67
VEGFA-220ENST00000519767 JAG2Q9Y219 1238 aa31.74■■■□□ 2.67
VEGFA-220ENST00000519767 PRMT6Q96LA8 375 aaPredicted RBP31.73■■■□□ 2.67
VEGFA-220ENST00000519767 NOB1Q9ULX3 412 aaKnown RBP31.73■■■□□ 2.67
VEGFA-220ENST00000519767 TRPA1O75762 1119 aa31.72■■■□□ 2.67
VEGFA-220ENST00000519767 RBM5P52756 815 aaKnown RBP eCLIP31.72■■■□□ 2.671e-9■□□□□ 9.1
VEGFA-220ENST00000519767 SERPINA10Q9UK55 444 aa31.72■■■□□ 2.67
VEGFA-220ENST00000519767 VGLL2Q8N8G2 317 aa31.71■■■□□ 2.67
VEGFA-220ENST00000519767 COL1A1P02452 1464 aaPredicted RBP31.71■■■□□ 2.67
VEGFA-220ENST00000519767 SUPT20HL1Q3ZLR7 823 aa31.7■■■□□ 2.67
VEGFA-220ENST00000519767 TTF2Q9UNY4 1162 aaKnown RBP31.7■■■□□ 2.67
VEGFA-220ENST00000519767 A0A1B0GUL6 1792 aa31.69■■■□□ 2.66
VEGFA-220ENST00000519767 UBTFL1P0CB47 393 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-220ENST00000519767 LDLRAD1Q5T700 205 aa31.69■■■□□ 2.66
VEGFA-220ENST00000519767 PPP1R12BO60237 982 aaPredicted RBP31.68■■■□□ 2.66
VEGFA-220ENST00000519767 FRAT2O75474 233 aaPredicted RBP31.68■■■□□ 2.66
VEGFA-220ENST00000519767 PTPN12Q05209 780 aaKnown RBP31.68■■■□□ 2.66
VEGFA-220ENST00000519767 KLHDC4Q8TBB5 520 aa31.68■■■□□ 2.66
VEGFA-220ENST00000519767 TBC1D22AQ8WUA7 517 aa31.68■■■□□ 2.66
VEGFA-220ENST00000519767 PCDHAC2Q9Y5I4 1007 aa31.68■■■□□ 2.66
VEGFA-220ENST00000519767 EYA2O00167 538 aa31.67■■■□□ 2.66
VEGFA-220ENST00000519767 PUM3Q15397 648 aaKnown RBP31.67■■■□□ 2.66
VEGFA-220ENST00000519767 ARHGAP45Q92619 1136 aa31.67■■■□□ 2.66
VEGFA-220ENST00000519767 FBXO3Q9UK99 471 aa31.67■■■□□ 2.66
VEGFA-220ENST00000519767 ANGEL1Q9UNK9 670 aaKnown RBP31.67■■■□□ 2.66
VEGFA-220ENST00000519767 KIF16BQ96L93 1317 aa31.67■■■□□ 2.66
VEGFA-220ENST00000519767 CLRN2A0PK11 232 aa31.66■■■□□ 2.66
VEGFA-220ENST00000519767 UNCXA6NJT0 531 aa31.66■■■□□ 2.66
VEGFA-220ENST00000519767 IFIT1P09914 478 aaKnown RBP31.66■■■□□ 2.66
VEGFA-220ENST00000519767 RFX5P48382 616 aaPredicted RBP31.66■■■□□ 2.66
VEGFA-220ENST00000519767 RARSP54136 660 aaKnown RBP31.66■■■□□ 2.66
VEGFA-220ENST00000519767 PRKG1Q13976 671 aa31.66■■■□□ 2.66
VEGFA-220ENST00000519767 VEZTQ9HBM0 779 aa31.66■■■□□ 2.66
VEGFA-220ENST00000519767 TM4SF4P48230 202 aa31.65■■■□□ 2.66
VEGFA-220ENST00000519767 TNFAIP1Q13829 316 aa31.65■■■□□ 2.66
VEGFA-220ENST00000519767 MAP3K11Q16584 847 aa31.65■■■□□ 2.66
VEGFA-220ENST00000519767 HDLBPQ00341 1268 aaKnown RBP31.64■■■□□ 2.66
VEGFA-220ENST00000519767 MCOLN1Q9GZU1 580 aa31.64■■■□□ 2.66
VEGFA-220ENST00000519767 FGFR2P21802 821 aa31.63■■■□□ 2.65
VEGFA-220ENST00000519767 BCAMP50895 628 aa31.63■■■□□ 2.65
VEGFA-220ENST00000519767 DZIP1LQ8IYY4 767 aaKnown RBP31.63■■■□□ 2.65
VEGFA-220ENST00000519767 SLC10A4Q96EP9 437 aa31.63■■■□□ 2.65
VEGFA-220ENST00000519767 MRIQ9BWK5 157 aa31.63■■■□□ 2.65
VEGFA-220ENST00000519767 ZNF70Q9UC06 446 aaPredicted RBP31.63■■■□□ 2.65
VEGFA-220ENST00000519767 CHAF1AQ13111 956 aaPredicted RBP31.62■■■□□ 2.65
VEGFA-220ENST00000519767 DGKZQ13574 1117 aa31.62■■■□□ 2.65
VEGFA-220ENST00000519767 RASA3Q14644 834 aa31.62■■■□□ 2.65
VEGFA-220ENST00000519767 SPDYE2Q495Y8 402 aa31.62■■■□□ 2.65
VEGFA-220ENST00000519767 LPIN2Q92539 896 aa31.62■■■□□ 2.65
VEGFA-220ENST00000519767 IQSEC3Q9UPP2 1182 aaPredicted RBP31.62■■■□□ 2.65
VEGFA-220ENST00000519767 CRKP46108 304 aa31.61■■■□□ 2.65
VEGFA-220ENST00000519767 SREBF2Q12772 1141 aa31.61■■■□□ 2.65
VEGFA-220ENST00000519767 SUGT1Q9Y2Z0 365 aa31.61■■■□□ 2.65
VEGFA-220ENST00000519767 CASP8AP2Q9UKL3 1982 aa31.61■■■□□ 2.65
VEGFA-220ENST00000519767 CIAO1O76071 339 aa31.6■■■□□ 2.65
VEGFA-220ENST00000519767 SLC5A1P13866 664 aa31.6■■■□□ 2.65
VEGFA-220ENST00000519767 ATG9AQ7Z3C6 839 aa31.6■■■□□ 2.65
VEGFA-220ENST00000519767 TDRD3Q9H7E2 651 aaKnown RBP31.6■■■□□ 2.65
VEGFA-220ENST00000519767 AOX1Q06278 1338 aa31.59■■■□□ 2.65
VEGFA-220ENST00000519767 IPO8O15397 1037 aaKnown RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms