RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 GTF3C6Q969F1 213 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 SETDB2Q96T68 719 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 NARFQ9UHQ1 456 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 RTCBQ9Y3I0 505 aaKnown RBP21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 MYH3P11055 1940 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 FIBPO43427 364 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 HMGB1P09429 215 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 DNM1Q05193 864 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 SCRN1Q12765 414 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 IMMTQ16891 758 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 MRE11P49959 708 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 NBPF5PQ86XG9 351 aaPredicted RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 MAGEB6Q8N7X4 407 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 CDC5LQ99459 802 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
CSGALNACT1-207ENST00000519222 ZSCAN25Q6NSZ9 544 aa21.27■■□□□ 1
CSGALNACT1-207ENST00000519222 NCOA5Q9HCD5 579 aaKnown RBP21.27■■□□□ 1
CSGALNACT1-207ENST00000519222 GYG1P46976 350 aa21.26■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RTN4Q9NQC3 1192 aaKnown RBP21.26■□□□□ 0.99
CSGALNACT1-207ENST00000519222 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
CSGALNACT1-207ENST00000519222 ZNF213O14771 459 aa21.26■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RC3H1Q5TC82 1133 aaKnown RBP21.26■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RREB1Q92766 1687 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 TCRBV5S4A2TA0A5A2 114 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 FOSBP53539 338 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 UBE3CQ15386 1083 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 SF3B3Q15393 1217 aaKnown RBP21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 NKX2-3Q8TAU0 364 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
CSGALNACT1-207ENST00000519222 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 SYCE3A1L190 88 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 NPHP1O15259 732 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 FAM196AQ6ZSG2 479 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RAB11FIP4Q86YS3 637 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 MINPP1Q9UNW1 487 aa21.24■□□□□ 0.99
CSGALNACT1-207ENST00000519222 INCENPQ9NQS7 918 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RTL9Q8NET4 1388 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 COL5A3P25940 1745 aaPredicted RBP21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 SPEF2Q9C093 1822 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 ABCF2Q9UG63 623 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 ATP6V1DQ9Y5K8 247 aa21.23■□□□□ 0.99
CSGALNACT1-207ENST00000519222 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 RFC4P35249 363 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 SLC51AQ86UW1 340 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 NLRP3Q96P20 1036 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 NBPF3Q9H094 633 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 BSDC1Q9NW68 430 aaPredicted RBP21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 LRP2BPQ9P2M1 347 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 LRP5O75197 1615 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 AKAP11Q9UKA4 1901 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 PFKFB2O60825 505 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 MBD3O95983 291 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 MIGA1Q8NAN2 632 aa21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 STRBPQ96SI9 672 aaKnown RBP21.22■□□□□ 0.99
CSGALNACT1-207ENST00000519222 MBD4O95243 580 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 CTDNEP1O95476 244 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 PDCP20941 246 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 PDIA3P30101 505 aaKnown RBP21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 AGXT2Q9BYV1 514 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 TRPC5Q9UL62 973 aaPredicted RBP21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 PRC1O43663 620 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 PRKAB2O43741 272 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 KLRK1P26718 216 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 TPTE2Q6XPS3 522 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 TBC1D10CQ8IV04 446 aa21.21■□□□□ 0.99
CSGALNACT1-207ENST00000519222 ZNF445P59923 1031 aa21.2■□□□□ 0.98
CSGALNACT1-207ENST00000519222 SLC10A5Q5PT55 438 aa21.2■□□□□ 0.98
CSGALNACT1-207ENST00000519222 RALYLQ86SE5 291 aaKnown RBP21.2■□□□□ 0.98
CSGALNACT1-207ENST00000519222 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
CSGALNACT1-207ENST00000519222 ANTXR2P58335 489 aa21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 VPS37DQ86XT2 251 aa21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 FAM184AQ8NB25 1140 aa21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 NCOA7Q8NI08 942 aa21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 NYXQ9GZU5 481 aa21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 TFIP11Q9UBB9 837 aaKnown RBP21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 RPS8P62241 208 aaKnown RBP21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 MB21D2Q8IYB1 491 aaPredicted RBP21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 NSUN7Q8NE18 718 aaKnown RBP21.19■□□□□ 0.98
CSGALNACT1-207ENST00000519222 ONECUT3O60422 494 aaPredicted RBP21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 MCM5P33992 734 aa21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 ISY1Q9ULR0 285 aaKnown RBP21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 BTAF1O14981 1849 aa21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 CICQ96RK0 1608 aaPredicted RBP21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 PTPDC1A2A3K4 754 aa21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 LCORLQ8N3X6 602 aa21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 EPB41L4AQ9HCS5 686 aaPredicted RBP21.18■□□□□ 0.98
CSGALNACT1-207ENST00000519222 H3BQV1 296 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 TAF1P21675 1872 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 IFFO2Q5TF58 517 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 ADGRA1Q86SQ6 560 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 TFCP2L1Q9NZI6 479 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 THSD7AQ9UPZ6 1657 aa21.17■□□□□ 0.98
CSGALNACT1-207ENST00000519222 TMEM87AQ8NBN3 555 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms