RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 PLEKHG4Q58EX7 1191 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 ZNF687Q8N1G0 1237 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 C3orf58Q8NDZ4 430 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 PFDN2Q9UHV9 154 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
CLK4-202ENST00000519132 EIF4A3P38919 411 aaKnown RBP9.43□□□□□ -0.9
CLK4-202ENST00000519132 FBXO27Q8NI29 283 aa9.43□□□□□ -0.9
CLK4-202ENST00000519132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLK4-202ENST00000519132 RNF17Q9BXT8 1623 aaKnown RBP9.43□□□□□ -0.9
CLK4-202ENST00000519132 CNPY4Q8N129 248 aa9.43□□□□□ -0.9
CLK4-202ENST00000519132 UBR7Q8N806 425 aa9.43□□□□□ -0.9
CLK4-202ENST00000519132 CNTN3Q9P232 1028 aa9.43□□□□□ -0.9
CLK4-202ENST00000519132 GNRH1P01148 92 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 PDGFRBP09619 1106 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
CLK4-202ENST00000519132 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
CLK4-202ENST00000519132 TBX4P57082 545 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 LRRC41Q15345 812 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
CLK4-202ENST00000519132 C1orf127Q8N9H9 656 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 IPO4Q8TEX9 1081 aaKnown RBP9.42□□□□□ -0.9
CLK4-202ENST00000519132 TNKS2Q9H2K2 1166 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 A2MP01023 1474 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 PZPP20742 1482 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 TRPA1O75762 1119 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 HRH3Q9Y5N1 445 aa9.42□□□□□ -0.9
CLK4-202ENST00000519132 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
CLK4-202ENST00000519132 PPP1R12AO14974 1030 aaPredicted RBP9.41□□□□□ -0.9
CLK4-202ENST00000519132 MICAL2O94851 1124 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 TLR3O15455 904 aaKnown RBP9.41□□□□□ -0.9
CLK4-202ENST00000519132 CELA3AP09093 270 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 EHBP1Q8NDI1 1231 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
CLK4-202ENST00000519132 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
CLK4-202ENST00000519132 MROH1Q8NDA8 1641 aa9.41□□□□□ -0.9
CLK4-202ENST00000519132 ARHGEF40Q8TER5 1519 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 B2RBV5 119 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 ST18O60284 1047 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 CMTR1Q8N1G2 835 aaKnown RBP9.4□□□□□ -0.9
CLK4-202ENST00000519132 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
CLK4-202ENST00000519132 RAPGEF3O95398 923 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
CLK4-202ENST00000519132 GORABQ5T7V8 394 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 FHDC1Q9C0D6 1143 aaPredicted RBP9.4□□□□□ -0.9
CLK4-202ENST00000519132 CD2APQ9Y5K6 639 aa9.4□□□□□ -0.9
CLK4-202ENST00000519132 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.91
CLK4-202ENST00000519132 PBX2P40425 430 aa9.4□□□□□ -0.91
CLK4-202ENST00000519132 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.91
CLK4-202ENST00000519132 CPLX3Q8WVH0 158 aa9.4□□□□□ -0.91
CLK4-202ENST00000519132 SHDQ96IW2 340 aa9.4□□□□□ -0.91
CLK4-202ENST00000519132 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.91
CLK4-202ENST00000519132 FAM135AQ9P2D6 1515 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 CENPCQ03188 943 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 CYP2U1Q7Z449 544 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 WDR75Q8IWA0 830 aaKnown RBP9.39□□□□□ -0.91
CLK4-202ENST00000519132 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 MEN1O00255 615 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 CDK2AP1O14519 115 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 ACPPP15309 386 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 MASP1P48740 699 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 FCGRTP55899 365 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 SEC16BQ96JE7 1060 aa9.39□□□□□ -0.91
CLK4-202ENST00000519132 AGLP35573 1532 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 POTEMA6NI47 508 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 FERMT3Q86UX7 667 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 CCDC116Q8IYX3 515 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 KCNMB2Q9Y691 235 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 IDH3AP50213 366 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 ST13P50502 369 aaKnown RBP9.38□□□□□ -0.91
CLK4-202ENST00000519132 FBXW10Q5XX13 1052 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 PRPF38AQ8NAV1 312 aaKnown RBP9.38□□□□□ -0.91
CLK4-202ENST00000519132 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
CLK4-202ENST00000519132 MPHOSPH9Q99550 1183 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 TET3O43151 1660 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 ATP10AO60312 1499 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 ZC3H13Q5T200 1668 aaKnown RBP9.38□□□□□ -0.91
CLK4-202ENST00000519132 TK2O00142 265 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 PHKA2P46019 1235 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 C7orf43Q8WVR3 580 aa9.38□□□□□ -0.91
CLK4-202ENST00000519132 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
CLK4-202ENST00000519132 YEATS2Q9ULM3 1422 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 PHACTR2O75167 634 aa9.37□□□□□ -0.91
CLK4-202ENST00000519132 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
CLK4-202ENST00000519132 KIAA0907Q7Z7F0 614 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms