RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 RRBP1Q9P2E9 1410 aaKnown RBP9.19□□□□□ -0.94
CCDC6-203ENST00000518638 TMEM229AB2RXF0 380 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
CCDC6-203ENST00000518638 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
CCDC6-203ENST00000518638 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 NBPF8Q3BBV2 869 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 PRSS36Q5K4E3 855 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 RREB1Q92766 1687 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 KIAA1024Q9UPX6 916 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 THSD7AQ9UPZ6 1657 aa9.18□□□□□ -0.94
CCDC6-203ENST00000518638 IFT172Q9UG01 1749 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 INHAP05111 366 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 CD33P20138 364 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
CCDC6-203ENST00000518638 TLR1Q15399 786 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 FAM196AQ6ZSG2 479 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 SIX5Q8N196 739 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 SPON1Q9HCB6 807 aa9.17□□□□□ -0.94
CCDC6-203ENST00000518638 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 ABCC11Q96J66 1382 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 FAM196BA6NMK8 535 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
CCDC6-203ENST00000518638 ATP4AP20648 1035 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 RASA1P20936 1047 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 LRP8Q14114 963 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
CCDC6-203ENST00000518638 ZNF468Q5VIY5 522 aaPredicted RBP9.16□□□□□ -0.94
CCDC6-203ENST00000518638 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 NUP188Q5SRE5 1749 aa9.16□□□□□ -0.94
CCDC6-203ENST00000518638 PCBP4P57723 403 aaKnown RBP9.15□□□□□ -0.94
CCDC6-203ENST00000518638 TNP2Q05952 138 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 PTK7Q13308 1070 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 CRTC2Q53ET0 693 aaPredicted RBP9.15□□□□□ -0.94
CCDC6-203ENST00000518638 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
CCDC6-203ENST00000518638 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 NACC1Q96RE7 527 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 CAMKK2Q96RR4 588 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 GOLGA2P5Q9HBQ8 144 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 BTG4Q9NY30 223 aa9.15□□□□□ -0.94
CCDC6-203ENST00000518638 SPATA31A5Q5VU36 1347 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 SPATA31A7Q8IWB4 1347 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.14□□□□□ -0.95
CCDC6-203ENST00000518638 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L15C9J2P7 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L13C9JLJ4 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L12C9JPN9 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L11C9JVI0 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L21D6R901 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L18D6R9N7 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L22D6RA61 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L17D6RBQ6 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L19D6RCP7 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L20D6RJB6 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
CCDC6-203ENST00000518638 DKK1O94907 266 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 USP17L24Q0WX57 530 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
CCDC6-203ENST00000518638 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 PRR12Q9ULL5 1215 aa9.14□□□□□ -0.95
CCDC6-203ENST00000518638 KRTAP4-8A0A0G2JLE6 195 aa9.13□□□□□ -0.95
CCDC6-203ENST00000518638 KCNQ2O43526 872 aa9.13□□□□□ -0.95
CCDC6-203ENST00000518638 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC6-203ENST00000518638 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
CCDC6-203ENST00000518638 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
CCDC6-203ENST00000518638 ANKARQ7Z5J8 1434 aa9.13□□□□□ -0.95
CCDC6-203ENST00000518638 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 RGPD3A6NKT7 1758 aaPredicted RBP9.12□□□□□ -0.95
CCDC6-203ENST00000518638 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
CCDC6-203ENST00000518638 RGPD4Q7Z3J3 1758 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
CCDC6-203ENST00000518638 ELOA3DA6NLF2 546 aaPredicted RBP9.12□□□□□ -0.95
CCDC6-203ENST00000518638 BACH1O14867 736 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 ELOA3BQ3SY89 546 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 CDCA8Q53HL2 280 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 ELOA3Q8NG57 546 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
CCDC6-203ENST00000518638 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
CCDC6-203ENST00000518638 CHD4Q14839 1912 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 ALS2Q96Q42 1657 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 A0A1W2PNR3 127 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 M0R2N6 131 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 TRIM37O94972 964 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 FAM157BP0CG42 384 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 ALAS2P22557 587 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 SMTNP53814 917 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 MTFR1Q15390 333 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 WAPLQ7Z5K2 1190 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 SERTAD1Q9UHV2 236 aa9.11□□□□□ -0.95
CCDC6-203ENST00000518638 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
CCDC6-203ENST00000518638 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
CCDC6-203ENST00000518638 ATG7O95352 703 aa9.1□□□□□ -0.95
CCDC6-203ENST00000518638 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
CCDC6-203ENST00000518638 ELOAQ14241 798 aaKnown RBP9.1□□□□□ -0.95
CCDC6-203ENST00000518638 ARSJQ5FYB0 599 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms