RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 SIL1Q9H173 461 aa13.2□□□□□ -0.3
SPIDR-206ENST00000518074 IL25Q9H293 177 aa13.2□□□□□ -0.3
SPIDR-206ENST00000518074 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-206ENST00000518074 CTSWP56202 376 aa13.19□□□□□ -0.3
SPIDR-206ENST00000518074 GCKRQ14397 625 aa13.19□□□□□ -0.3
SPIDR-206ENST00000518074 CHAMP1Q96JM3 812 aa13.19□□□□□ -0.3
SPIDR-206ENST00000518074 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
SPIDR-206ENST00000518074 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-206ENST00000518074 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
SPIDR-206ENST00000518074 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 CASP7P55210 303 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 GPSM2P81274 684 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-206ENST00000518074 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-206ENST00000518074 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
SPIDR-206ENST00000518074 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-206ENST00000518074 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
SPIDR-206ENST00000518074 CXCL9Q07325 125 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
SPIDR-206ENST00000518074 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 KLHDC4Q8TBB5 520 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 ZNF609O15014 1411 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 COL4A1P02462 1669 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 SCNN1DP51172 638 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 MCTP1Q6DN14 999 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 CSF1RP07333 972 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 MCCP23508 829 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 POLA2Q14181 598 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 SLC51AQ86UW1 340 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-206ENST00000518074 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
SPIDR-206ENST00000518074 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
SPIDR-206ENST00000518074 DTNBO60941 627 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 ADARB2Q9NS39 739 aaKnown RBP13.16□□□□□ -0.3
SPIDR-206ENST00000518074 STAP2Q9UGK3 403 aa13.16□□□□□ -0.3
SPIDR-206ENST00000518074 XDHP47989 1333 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 RPS12P25398 132 aaKnown RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 DPF2Q92785 391 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 CCDC8Q9H0W5 538 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 AACSQ86V21 672 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
SPIDR-206ENST00000518074 PGAP2Q9UHJ9 254 aa13.15□□□□□ -0.3
SPIDR-206ENST00000518074 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
SPIDR-206ENST00000518074 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
SPIDR-206ENST00000518074 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 GRM8O00222 908 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
SPIDR-206ENST00000518074 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
SPIDR-206ENST00000518074 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
SPIDR-206ENST00000518074 PSME4Q14997 1843 aa13.14□□□□□ -0.31
SPIDR-206ENST00000518074 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-206ENST00000518074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-206ENST00000518074 EPS15P42566 896 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-206ENST00000518074 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 ANKRD2Q9GZV1 360 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 GREM2Q9H772 168 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
SPIDR-206ENST00000518074 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPIDR-206ENST00000518074 HSP90AB4PQ58FF6 505 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 UTYO14607 1347 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 ECE2O60344 883 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 UFL1O94874 794 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
SPIDR-206ENST00000518074 MMP14P50281 582 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 MED23Q9ULK4 1368 aa13.12□□□□□ -0.31
SPIDR-206ENST00000518074 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms