RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GNAI2P04899 355 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 BCAMP50895 628 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 SULF1Q8IWU6 871 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 IQSEC3Q9UPP2 1182 aaPredicted RBP17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 TLL2Q9Y6L7 1015 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 PSME4Q14997 1843 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 MMP14P50281 582 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 FKBP1AP62942 108 aaKnown RBP17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 MTX1Q13505 466 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 VPS37DQ86XT2 251 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 FTSJ3Q8IY81 847 aaKnown RBP17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
PDGFRB-202ENST00000517488 IFIT1P09914 478 aaKnown RBP17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 CAVIN4Q5BKX8 364 aa17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 SAPCD2Q86UD0 394 aa17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
PDGFRB-202ENST00000517488 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 SLC5A1P13866 664 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 LPIN2Q92539 896 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 ZNF646O15015 1829 aaPredicted RBP17.54■□□□□ 0.4
PDGFRB-202ENST00000517488 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
PDGFRB-202ENST00000517488 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
PDGFRB-202ENST00000517488 CYP4F22Q6NT55 531 aa17.53■□□□□ 0.4
PDGFRB-202ENST00000517488 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
PDGFRB-202ENST00000517488 PANK1Q8TE04 598 aa17.53■□□□□ 0.4
PDGFRB-202ENST00000517488 WDR33Q9C0J8 1336 aaKnown RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 HSPA1AP0DMV8 641 aaKnown RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 HSPA1BP0DMV9 641 aaKnown RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 DLGAP5Q15398 846 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 GRIK5Q16478 980 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 MTMR14Q8NCE2 650 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 GBA2Q9HCG7 927 aaPredicted RBP17.52■□□□□ 0.4
PDGFRB-202ENST00000517488 AOX1Q06278 1338 aa17.51■□□□□ 0.39
PDGFRB-202ENST00000517488 GRM1Q13255 1194 aa17.51■□□□□ 0.39
PDGFRB-202ENST00000517488 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
PDGFRB-202ENST00000517488 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 ADORA1P30542 326 aa17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 HUNKP57058 714 aa17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 C2orf69Q8N8R5 385 aa17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
PDGFRB-202ENST00000517488 ECE1P42892 770 aa17.49■□□□□ 0.39
PDGFRB-202ENST00000517488 TIMM10P62072 90 aa17.49■□□□□ 0.39
PDGFRB-202ENST00000517488 TFCP2Q12800 502 aa17.49■□□□□ 0.39
PDGFRB-202ENST00000517488 HHIPL1Q96JK4 782 aa17.49■□□□□ 0.39
PDGFRB-202ENST00000517488 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 AOC2O75106 756 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 PHKA1P46020 1223 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 POLA2Q14181 598 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 TBC1D22AQ8WUA7 517 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
PDGFRB-202ENST00000517488 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
PDGFRB-202ENST00000517488 SERPINA10Q9UK55 444 aa17.47■□□□□ 0.39
PDGFRB-202ENST00000517488 COL1A1P02452 1464 aaPredicted RBP17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 CRKP46108 304 aa17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 DEFB129Q9H1M3 183 aa17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 WBP1LQ9NX94 342 aa17.46■□□□□ 0.39
PDGFRB-202ENST00000517488 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 MYO1BO43795 1136 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 AKAP2Q9Y2D5 859 aa17.45■□□□□ 0.38
PDGFRB-202ENST00000517488 FOXN1O15353 648 aa17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 MS4A1P11836 297 aa17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 ZIC5Q96T25 663 aa17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 COG6Q9Y2V7 657 aa17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 SUGT1Q9Y2Z0 365 aa17.44■□□□□ 0.38
PDGFRB-202ENST00000517488 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms