RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
LINC01843-201ENST00000515627 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
LINC01843-201ENST00000515627 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
LINC01843-201ENST00000515627 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
LINC01843-201ENST00000515627 SAGE1Q9NXZ1 904 aa12.9□□□□□ -0.34
LINC01843-201ENST00000515627 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
LINC01843-201ENST00000515627 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
LINC01843-201ENST00000515627 UTYO14607 1347 aa12.89□□□□□ -0.35
LINC01843-201ENST00000515627 TRPA1O75762 1119 aa12.89□□□□□ -0.35
LINC01843-201ENST00000515627 MMP14P50281 582 aa12.89□□□□□ -0.35
LINC01843-201ENST00000515627 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
LINC01843-201ENST00000515627 PLIN1O60240 522 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 ZNF804AQ7Z570 1209 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
LINC01843-201ENST00000515627 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 F8W031 263 aaPredicted RBP12.87□□□□□ -0.35
LINC01843-201ENST00000515627 FKBP1AP62942 108 aaKnown RBP12.87□□□□□ -0.35
LINC01843-201ENST00000515627 DGKZQ13574 1117 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
LINC01843-201ENST00000515627 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
LINC01843-201ENST00000515627 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 BICC1Q9H694 974 aaKnown RBP12.87□□□□□ -0.35
LINC01843-201ENST00000515627 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 ECM29Q5VYK3 1845 aa12.87□□□□□ -0.35
LINC01843-201ENST00000515627 GYG1P46976 350 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 PTPN12Q05209 780 aaKnown RBP12.86□□□□□ -0.35
LINC01843-201ENST00000515627 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 PRKG1Q13976 671 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
LINC01843-201ENST00000515627 DLGAP5Q15398 846 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
LINC01843-201ENST00000515627 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
LINC01843-201ENST00000515627 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
LINC01843-201ENST00000515627 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
LINC01843-201ENST00000515627 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
LINC01843-201ENST00000515627 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 E9PSI1 815 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
LINC01843-201ENST00000515627 PTPRCP08575 1304 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
LINC01843-201ENST00000515627 CLRN2A0PK11 232 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 NF2P35240 595 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 RGS19P49795 217 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
LINC01843-201ENST00000515627 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 KLHDC4Q8TBB5 520 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
LINC01843-201ENST00000515627 ANGEL1Q9UNK9 670 aaKnown RBP12.84□□□□□ -0.35
LINC01843-201ENST00000515627 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
LINC01843-201ENST00000515627 TM4SF4P48230 202 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 GRIK5Q16478 980 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 MFSD14BQ5SR56 506 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
LINC01843-201ENST00000515627 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
LINC01843-201ENST00000515627 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
LINC01843-201ENST00000515627 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
LINC01843-201ENST00000515627 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
LINC01843-201ENST00000515627 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
LINC01843-201ENST00000515627 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
LINC01843-201ENST00000515627 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
LINC01843-201ENST00000515627 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
LINC01843-201ENST00000515627 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
LINC01843-201ENST00000515627 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
LINC01843-201ENST00000515627 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
LINC01843-201ENST00000515627 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
LINC01843-201ENST00000515627 VEZTQ9HBM0 779 aa12.81□□□□□ -0.36
LINC01843-201ENST00000515627 TTF2Q9UNY4 1162 aaKnown RBP12.81□□□□□ -0.36
LINC01843-201ENST00000515627 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
LINC01843-201ENST00000515627 LAMB1P07942 1786 aa12.81□□□□□ -0.36
LINC01843-201ENST00000515627 MYO1BO43795 1136 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 PDE8BO95263 885 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC01843-201ENST00000515627 RASA3Q14644 834 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
LINC01843-201ENST00000515627 MIER1Q8N108 512 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
LINC01843-201ENST00000515627 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
LINC01843-201ENST00000515627 SERPINA10Q9UK55 444 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
LINC01843-201ENST00000515627 USP2O75604 605 aaPredicted RBP12.79□□□□□ -0.36
LINC01843-201ENST00000515627 FGFR2P21802 821 aa12.79□□□□□ -0.36
LINC01843-201ENST00000515627 CRKP46108 304 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms