RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 MRPS9P82933 396 aaKnown RBP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 PAG1Q9NWQ8 432 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 FLT4P35916 1363 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 ZBTB7BO15156 539 aaPredicted RBP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 F13A1P00488 732 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 HS1BP3Q53T59 392 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 V9GYY5 206 aaPredicted RBP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 GNA11P29992 359 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 HS2ST1Q7LGA3 356 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 SREK1Q8WXA9 508 aaKnown RBP18.2■□□□□ 0.5
TRIM41-207ENST00000515223 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 ASIC1P78348 528 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 CCDC117Q8IWD4 279 aaPredicted RBP18.19■□□□□ 0.5
TRIM41-207ENST00000515223 POTEB2H3BUK9 544 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 GCP02774 474 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 CTAGE1Q96RT6 745 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 BACH1O14867 736 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.59e-9■■■■□ 25.9
TRIM41-207ENST00000515223 PRPHP41219 470 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 MAGI3Q5TCQ9 1506 aa18.19■□□□□ 0.5
TRIM41-207ENST00000515223 FAM13AO94988 1023 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 MSANTD4Q8NCY6 345 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 PICK1Q9NRD5 415 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 C17orf53Q8N3J3 647 aaPredicted RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 MRVI1Q9Y6F6 885 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 CCDC175P0C221 793 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 ATP8B2P98198 1209 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 PPP1R14CQ8TAE6 165 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 NOD1Q9Y239 953 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.18■□□□□ 0.55e-8■■■□□ 18.4
TRIM41-207ENST00000515223 TRIM75PA6NK02 468 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 AFMP43652 599 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 SNW1Q13573 536 aaKnown RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 WDR70Q9NW82 654 aa18.18■□□□□ 0.5
TRIM41-207ENST00000515223 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 EIF4A2Q14240 407 aaKnown RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
TRIM41-207ENST00000515223 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
TRIM41-207ENST00000515223 PTGS1P23219 599 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
TRIM41-207ENST00000515223 DNAJC25Q9H1X3 360 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 DACT1Q9NYF0 836 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 CYLC1P35663 651 aaPredicted RBP18.17■□□□□ 0.5
TRIM41-207ENST00000515223 HOOK2Q96ED9 719 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 HELBQ8NG08 1087 aaPredicted RBP18.17■□□□□ 0.5
TRIM41-207ENST00000515223 FAM212AQ96EL1 285 aa18.17■□□□□ 0.5
TRIM41-207ENST00000515223 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 FAM200AQ8TCP9 573 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 AK2P54819 239 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 NAP1L4Q99733 375 aaKnown RBP18.16■□□□□ 0.5
TRIM41-207ENST00000515223 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 CEP83Q9Y592 693 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
TRIM41-207ENST00000515223 MAGEB6Q8N7X4 407 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
TRIM41-207ENST00000515223 RNF113AO15541 343 aaKnown RBP18.15■□□□□ 0.5
TRIM41-207ENST00000515223 POLKQ9UBT6 870 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 PAXBP1Q9Y5B6 917 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 MIGA1Q8NAN2 632 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 DTNBO60941 627 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 ARL1P40616 181 aaPredicted RBP18.15■□□□□ 0.5
TRIM41-207ENST00000515223 RGS22Q8NE09 1264 aa18.15■□□□□ 0.5
TRIM41-207ENST00000515223 OTUD6BQ8N6M0 293 aa18.14■□□□□ 0.49
TRIM41-207ENST00000515223 GPHNQ9NQX3 736 aaPredicted RBP18.14■□□□□ 0.49
TRIM41-207ENST00000515223 CPA1P15085 419 aa18.14■□□□□ 0.49
TRIM41-207ENST00000515223 PDE6BP35913 854 aa18.14■□□□□ 0.49
TRIM41-207ENST00000515223 MTHFSDQ2M296 383 aaKnown RBP18.14■□□□□ 0.49
TRIM41-207ENST00000515223 Q6ZUG5 572 aa18.14■□□□□ 0.49
TRIM41-207ENST00000515223 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.49
TRIM41-207ENST00000515223 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
TRIM41-207ENST00000515223 MAST3O60307 1309 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 ASXL2Q76L83 1435 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 UFL1O94874 794 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 SKILP12757 684 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 TEX11Q8IYF3 940 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 DPH6Q7L8W6 267 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 TYRO3Q06418 890 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
TRIM41-207ENST00000515223 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
TRIM41-207ENST00000515223 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 SELENOOQ9BVL4 669 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 IQCGQ9H095 443 aaKnown RBP18.13■□□□□ 0.49
TRIM41-207ENST00000515223 KDM5CP41229 1560 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
TRIM41-207ENST00000515223 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
TRIM41-207ENST00000515223 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms