RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 ICA1Q05084 483 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 TRAF1Q13077 416 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 SAFB2Q14151 953 aaKnown RBP eCLIP8.25□□□□□ -1.09
LDB2-216ENST00000515064 BEND6Q5SZJ8 279 aaPredicted RBP8.25□□□□□ -1.09
LDB2-216ENST00000515064 ARMCX5Q6P1M9 558 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 FAM177A1Q8N128 213 aaPredicted RBP8.25□□□□□ -1.09
LDB2-216ENST00000515064 TATDN2Q93075 761 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 NAT10Q9H0A0 1025 aaKnown RBP8.25□□□□□ -1.09
LDB2-216ENST00000515064 GBP3Q9H0R5 595 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 CD248Q9HCU0 757 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 TRIM35Q9UPQ4 493 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 MRFAP1Q9Y605 127 aa8.25□□□□□ -1.09
LDB2-216ENST00000515064 YTHDC2Q9H6S0 1430 aaKnown RBP8.25□□□□□ -1.09
LDB2-216ENST00000515064 SOS2Q07890 1332 aaPredicted RBP8.25□□□□□ -1.09
LDB2-216ENST00000515064 KIAA0754O94854 1291 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 MAP3K9P80192 1104 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 GRIK3Q13003 919 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 TRIM65Q6PJ69 517 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.24□□□□□ -1.09
LDB2-216ENST00000515064 CEP57L1Q8IYX8 460 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 MRPL50Q8N5N7 158 aaKnown RBP8.24□□□□□ -1.09
LDB2-216ENST00000515064 CCDC26Q8TAB7 109 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 IL17RAQ96F46 866 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 NSD3Q9BZ95 1437 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 TTC21AQ8NDW8 1320 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 RNF40O75150 1001 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 AK2P54819 239 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 CHMP4BP1P59074 171 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 CCDC83Q8IWF9 413 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 AOPEPQ8N6M6 819 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 ANKRD44Q8N8A2 993 aa8.24□□□□□ -1.09
LDB2-216ENST00000515064 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
LDB2-216ENST00000515064 BAG1Q99933 345 aaPredicted RBP8.24□□□□□ -1.09
LDB2-216ENST00000515064 API5Q9BZZ5 524 aaKnown RBP8.24□□□□□ -1.09
LDB2-216ENST00000515064 SOS1Q07889 1333 aaPredicted RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 MYBL2P10244 700 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 USP5P45974 858 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 PDE1AP54750 535 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 GNG11P61952 73 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 ATP2B2Q01814 1243 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 DHX40Q8IX18 779 aaKnown RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 RILPL2Q969X0 211 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 CLIC6Q96NY7 704 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 PSMD1Q99460 953 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 ANO10Q9NW15 660 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 RPGRIP1LQ68CZ1 1315 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 PPLO60437 1756 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 FRMD3A2A2Y4 597 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 GOLGA6L9A6NEM1 432 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 SNUPNO95149 360 aaKnown RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 IBSPP21815 317 aaPredicted RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 CASP8Q14790 479 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 NAA25Q14CX7 972 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 RUFY3Q7L099 469 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 FERMT3Q86UX7 667 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 RPAP2Q8IXW5 612 aaPredicted RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 AMOTL1Q8IY63 956 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 THOC1Q96FV9 657 aaKnown RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
LDB2-216ENST00000515064 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 L1RE1Q9UN81 338 aa8.23□□□□□ -1.09
LDB2-216ENST00000515064 ANKRD18BA2A2Z9 1011 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 MYO1FO00160 1098 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 KINO60870 393 aaKnown RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 AP1G2O75843 785 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 HMGB1P09429 215 aaKnown RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 EZRP15311 586 aaKnown RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 CHMLP26374 656 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 HSPA4P34932 840 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 PDCD2Q16342 344 aaPredicted RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 KIAA1328Q86T90 577 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 KCNB2Q92953 911 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 ZSWIM4Q9H7M6 989 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 FANCGO15287 622 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 EPB41L2O43491 1005 aaKnown RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 PDCP20941 246 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 CDR1P51861 262 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 PSMD2Q13200 908 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 CEP85LQ5SZL2 805 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 WLSQ5T9L3 541 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 FCHSD1Q86WN1 690 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 LEO1Q8WVC0 666 aaPredicted RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 KIF9Q9HAQ2 790 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
LDB2-216ENST00000515064 IFNKQ9P0W0 207 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 RAB21Q9UL25 225 aa8.22□□□□□ -1.09
LDB2-216ENST00000515064 RTN2O75298 545 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 WDHD1O75717 1129 aaPredicted RBP8.21□□□□□ -1.1
LDB2-216ENST00000515064 TUBB4BP68371 445 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 CEP57Q86XR8 500 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 DHX58Q96C10 678 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 ZSCAN31Q96LW9 406 aaPredicted RBP8.21□□□□□ -1.1
LDB2-216ENST00000515064 TTC14Q96N46 770 aa8.21□□□□□ -1.1
LDB2-216ENST00000515064 XPO4Q9C0E2 1151 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms