RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 MTMR14Q8NCE2 650 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 FGFR2P21802 821 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 GYG1P46976 350 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 HUNKP57058 714 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
SGCA-211ENST00000514934 TAF7LQ5H9L4 462 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 ZNF804AQ7Z570 1209 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 FBXO33Q7Z6M2 555 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
SGCA-211ENST00000514934 PLIN1O60240 522 aa18.43■□□□□ 0.54
SGCA-211ENST00000514934 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
SGCA-211ENST00000514934 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
SGCA-211ENST00000514934 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
SGCA-211ENST00000514934 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
SGCA-211ENST00000514934 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
SGCA-211ENST00000514934 FBXW7Q969H0 707 aa18.43■□□□□ 0.54
SGCA-211ENST00000514934 COL1A1P02452 1464 aaPredicted RBP18.43■□□□□ 0.54
SGCA-211ENST00000514934 PDE8BO95263 885 aa18.42■□□□□ 0.54
SGCA-211ENST00000514934 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
SGCA-211ENST00000514934 JAG2Q9Y219 1238 aa18.42■□□□□ 0.54
SGCA-211ENST00000514934 LBX1P52954 281 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 GRIK5Q16478 980 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 PRAMEF18Q5VWM3 479 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 RGMBQ6NW40 437 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 OGFOD1Q8N543 542 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 MEIS3Q99687 375 aa18.41■□□□□ 0.54
SGCA-211ENST00000514934 API5Q9BZZ5 524 aaKnown RBP18.41■□□□□ 0.54
SGCA-211ENST00000514934 SLC10A3P09131 477 aa18.4■□□□□ 0.54
SGCA-211ENST00000514934 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
SGCA-211ENST00000514934 MOB2Q70IA6 237 aa18.4■□□□□ 0.54
SGCA-211ENST00000514934 KIF16BQ96L93 1317 aa18.4■□□□□ 0.54
SGCA-211ENST00000514934 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 EYA2O00167 538 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 BCAR3O75815 825 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 TRIM27P14373 513 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 HIBADHP31937 336 aaKnown RBP18.39■□□□□ 0.53
SGCA-211ENST00000514934 GRM1Q13255 1194 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 C2orf69Q8N8R5 385 aa18.39■□□□□ 0.53
SGCA-211ENST00000514934 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
SGCA-211ENST00000514934 FKBP1BP68106 108 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 NOGQ13253 232 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 RASAL3Q86YV0 1011 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 AIDAQ96BJ3 306 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 LRRFIP2Q9Y608 721 aaKnown RBP18.38■□□□□ 0.53
SGCA-211ENST00000514934 MYH2Q9UKX2 1941 aa18.38■□□□□ 0.53
SGCA-211ENST00000514934 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
SGCA-211ENST00000514934 CFAP100Q494V2 611 aa18.37■□□□□ 0.53
SGCA-211ENST00000514934 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
SGCA-211ENST00000514934 F8W031 263 aaPredicted RBP18.36■□□□□ 0.53
SGCA-211ENST00000514934 CIAO1O76071 339 aa18.36■□□□□ 0.53
SGCA-211ENST00000514934 BCAMP50895 628 aa18.36■□□□□ 0.53
SGCA-211ENST00000514934 MTX1Q13505 466 aa18.36■□□□□ 0.53
SGCA-211ENST00000514934 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
SGCA-211ENST00000514934 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
SGCA-211ENST00000514934 TSKSQ9UJT2 592 aa18.36■□□□□ 0.53
SGCA-211ENST00000514934 MYO5AQ9Y4I1 1855 aaKnown RBP18.35■□□□□ 0.53
SGCA-211ENST00000514934 PUM3Q15397 648 aaKnown RBP18.35■□□□□ 0.53
SGCA-211ENST00000514934 DLGAP5Q15398 846 aa18.35■□□□□ 0.53
SGCA-211ENST00000514934 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
SGCA-211ENST00000514934 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
SGCA-211ENST00000514934 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
SGCA-211ENST00000514934 ZNF157P51786 506 aaPredicted RBP18.34■□□□□ 0.53
SGCA-211ENST00000514934 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
SGCA-211ENST00000514934 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
SGCA-211ENST00000514934 ATF7IPQ6VMQ6 1270 aa18.34■□□□□ 0.53
SGCA-211ENST00000514934 CCDC102AQ96A19 550 aa18.34■□□□□ 0.53
SGCA-211ENST00000514934 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
SGCA-211ENST00000514934 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
SGCA-211ENST00000514934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
SGCA-211ENST00000514934 HTTP42858 3142 aa18.34■□□□□ 0.53
SGCA-211ENST00000514934 UBE2Q2LH0YL09 131 aa18.33■□□□□ 0.52
SGCA-211ENST00000514934 ZBTB22O15209 634 aa18.33■□□□□ 0.52
SGCA-211ENST00000514934 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.52
SGCA-211ENST00000514934 SPDYE2Q495Y8 402 aa18.33■□□□□ 0.52
SGCA-211ENST00000514934 DEFB129Q9H1M3 183 aa18.33■□□□□ 0.52
SGCA-211ENST00000514934 FZD1Q9UP38 647 aa18.33■□□□□ 0.52
SGCA-211ENST00000514934 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
SGCA-211ENST00000514934 MAP3K11Q16584 847 aa18.32■□□□□ 0.52
SGCA-211ENST00000514934 CSRNP1Q96S65 589 aa18.32■□□□□ 0.52
SGCA-211ENST00000514934 TTF2Q9UNY4 1162 aaKnown RBP18.32■□□□□ 0.52
SGCA-211ENST00000514934 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 CA12O43570 354 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 CDAN1Q8IWY9 1227 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 LPIN2Q92539 896 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 TEPSINQ96N21 525 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 SIL1Q9H173 461 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
SGCA-211ENST00000514934 CRKP46108 304 aa18.3■□□□□ 0.52
SGCA-211ENST00000514934 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
SGCA-211ENST00000514934 PPP2R3BQ9Y5P8 575 aa18.3■□□□□ 0.52
SGCA-211ENST00000514934 DOCK2Q92608 1830 aa18.29■□□□□ 0.52
SGCA-211ENST00000514934 SLC34A2O95436 690 aa18.29■□□□□ 0.52
SGCA-211ENST00000514934 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
SGCA-211ENST00000514934 HDLBPQ00341 1268 aaKnown RBP18.29■□□□□ 0.52
SGCA-211ENST00000514934 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
SGCA-211ENST00000514934 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms