RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 EYA2O00167 538 aa30.61■■■□□ 2.49
SNF8-213ENST00000514929 HUNKP57058 714 aa30.61■■■□□ 2.49
SNF8-213ENST00000514929 FKBP1AP62942 108 aaKnown RBP30.61■■■□□ 2.49
SNF8-213ENST00000514929 ATF7IPQ6VMQ6 1270 aa30.61■■■□□ 2.49
SNF8-213ENST00000514929 VPS37DQ86XT2 251 aa30.61■■■□□ 2.49
SNF8-213ENST00000514929 VGLL2Q8N8G2 317 aa30.61■■■□□ 2.49
SNF8-213ENST00000514929 TRIM27P14373 513 aa30.6■■■□□ 2.49
SNF8-213ENST00000514929 PTPN12Q05209 780 aaKnown RBP30.6■■■□□ 2.49
SNF8-213ENST00000514929 TDRD7Q8NHU6 1098 aaKnown RBP30.6■■■□□ 2.49
SNF8-213ENST00000514929 ZBED9Q6R2W3 1325 aa30.59■■■□□ 2.49
SNF8-213ENST00000514929 F8W031 263 aaPredicted RBP30.59■■■□□ 2.49
SNF8-213ENST00000514929 MAP2K1Q02750 393 aaPredicted RBP30.59■■■□□ 2.49
SNF8-213ENST00000514929 CAVIN4Q5BKX8 364 aa30.59■■■□□ 2.49
SNF8-213ENST00000514929 SCAF8Q9UPN6 1271 aaKnown RBP30.59■■■□□ 2.49
SNF8-213ENST00000514929 FAM205AQ6ZU69 1335 aa30.58■■■□□ 2.49
SNF8-213ENST00000514929 GNAI3P08754 354 aa30.58■■■□□ 2.49
SNF8-213ENST00000514929 DLGAP5Q15398 846 aa30.58■■■□□ 2.49
SNF8-213ENST00000514929 WBP1LQ9NX94 342 aa30.58■■■□□ 2.49
SNF8-213ENST00000514929 FOXN1O15353 648 aa30.57■■■□□ 2.48
SNF8-213ENST00000514929 PUM3Q15397 648 aaKnown RBP30.57■■■□□ 2.48
SNF8-213ENST00000514929 COL13A1Q5TAT6 717 aaPredicted RBP30.57■■■□□ 2.48
SNF8-213ENST00000514929 CLUAP1Q96AJ1 413 aa30.57■■■□□ 2.48
SNF8-213ENST00000514929 SIL1Q9H173 461 aa30.57■■■□□ 2.48
SNF8-213ENST00000514929 TNNQ9UQP3 1299 aa30.57■■■□□ 2.48
SNF8-213ENST00000514929 THSD7BQ9C0I4 1608 aa30.57■■■□□ 2.48
SNF8-213ENST00000514929 AOC2O75106 756 aa30.56■■■□□ 2.48
SNF8-213ENST00000514929 FBXO33Q7Z6M2 555 aa30.56■■■□□ 2.48
SNF8-213ENST00000514929 FRAT2O75474 233 aaPredicted RBP30.55■■■□□ 2.48
SNF8-213ENST00000514929 IFIT1P09914 478 aaKnown RBP30.55■■■□□ 2.48
SNF8-213ENST00000514929 MAP2K2P36507 400 aa30.55■■■□□ 2.48
SNF8-213ENST00000514929 MFSD14BQ5SR56 506 aa30.55■■■□□ 2.48
SNF8-213ENST00000514929 ZBED3Q96IU2 234 aaPredicted RBP30.55■■■□□ 2.48
SNF8-213ENST00000514929 FBXO3Q9UK99 471 aa30.55■■■□□ 2.48
SNF8-213ENST00000514929 ZKSCAN2Q63HK3 967 aa30.54■■■□□ 2.48
SNF8-213ENST00000514929 IQSEC3Q9UPP2 1182 aaPredicted RBP30.54■■■□□ 2.48
SNF8-213ENST00000514929 ATG9AQ7Z3C6 839 aa30.53■■■□□ 2.48
SNF8-213ENST00000514929 APOBEC3FQ8IUX4 373 aaKnown RBP30.53■■■□□ 2.48
SNF8-213ENST00000514929 MTMR14Q8NCE2 650 aa30.53■■■□□ 2.48
SNF8-213ENST00000514929 CIAO1O76071 339 aa30.52■■■□□ 2.48
SNF8-213ENST00000514929 FGFR2P21802 821 aa30.52■■■□□ 2.48
SNF8-213ENST00000514929 CTCFP49711 727 aaPredicted RBP30.52■■■□□ 2.48
SNF8-213ENST00000514929 CFAP100Q494V2 611 aa30.52■■■□□ 2.48
SNF8-213ENST00000514929 RGMBQ6NW40 437 aa30.52■■■□□ 2.48
SNF8-213ENST00000514929 BEGAINQ9BUH8 593 aa30.52■■■□□ 2.48
SNF8-213ENST00000514929 SLC5A1P13866 664 aa30.51■■■□□ 2.47
SNF8-213ENST00000514929 BCAMP50895 628 aa30.51■■■□□ 2.47
SNF8-213ENST00000514929 RBM5P52756 815 aaKnown RBP eCLIP30.51■■■□□ 2.47
SNF8-213ENST00000514929 CHAF1AQ13111 956 aaPredicted RBP30.51■■■□□ 2.47
SNF8-213ENST00000514929 PRAMEF18Q5VWM3 479 aa30.51■■■□□ 2.47
SNF8-213ENST00000514929 LPIN2Q92539 896 aa30.51■■■□□ 2.47
SNF8-213ENST00000514929 MYO1BO43795 1136 aa30.5■■■□□ 2.47
SNF8-213ENST00000514929 FKBP1BP68106 108 aa30.5■■■□□ 2.47
SNF8-213ENST00000514929 IFFO2Q5TF58 517 aa30.5■■■□□ 2.47
SNF8-213ENST00000514929 CEP126Q9P2H0 1117 aa30.5■■■□□ 2.47
SNF8-213ENST00000514929 TTF2Q9UNY4 1162 aaKnown RBP30.5■■■□□ 2.47
SNF8-213ENST00000514929 PA2G4Q9UQ80 394 aaKnown RBP30.5■■■□□ 2.47
SNF8-213ENST00000514929 PCDHAC2Q9Y5I4 1007 aa30.5■■■□□ 2.47
SNF8-213ENST00000514929 ZNF157P51786 506 aaPredicted RBP30.49■■■□□ 2.47
SNF8-213ENST00000514929 NOGQ13253 232 aa30.49■■■□□ 2.47
SNF8-213ENST00000514929 COPRSQ9NQ92 184 aa30.49■■■□□ 2.47
SNF8-213ENST00000514929 SPDYE2BA6NHP3 402 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 SRGAP3O43295 1099 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 SPDYE6P0CI01 402 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 NF2P35240 595 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 IL15P40933 162 aaPredicted RBP30.48■■■□□ 2.47
SNF8-213ENST00000514929 TMEM57Q8N5G2 664 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 CCDC102AQ96A19 550 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 PAPPA2Q9BXP8 1791 aa30.48■■■□□ 2.47
SNF8-213ENST00000514929 ARAP2Q8WZ64 1704 aa30.47■■■□□ 2.47
SNF8-213ENST00000514929 GNAI2P04899 355 aa30.47■■■□□ 2.47
SNF8-213ENST00000514929 TBC1D22AQ8WUA7 517 aa30.47■■■□□ 2.47
SNF8-213ENST00000514929 PRMT6Q96LA8 375 aaPredicted RBP30.47■■■□□ 2.47
SNF8-213ENST00000514929 TTLL12Q14166 644 aaPredicted RBP30.46■■■□□ 2.47
SNF8-213ENST00000514929 ATP2B3Q16720 1220 aa30.46■■■□□ 2.47
SNF8-213ENST00000514929 CLRN2A0PK11 232 aa30.45■■■□□ 2.47
SNF8-213ENST00000514929 MTX1Q13505 466 aa30.45■■■□□ 2.47
SNF8-213ENST00000514929 FTSJ3Q8IY81 847 aaKnown RBP30.45■■■□□ 2.47
SNF8-213ENST00000514929 SERPINA10Q9UK55 444 aa30.45■■■□□ 2.47
SNF8-213ENST00000514929 ECM29Q5VYK3 1845 aa30.45■■■□□ 2.46
SNF8-213ENST00000514929 LBX1P52954 281 aa30.44■■■□□ 2.46
SNF8-213ENST00000514929 TNS4Q8IZW8 715 aa30.44■■■□□ 2.46
SNF8-213ENST00000514929 DEFB129Q9H1M3 183 aa30.44■■■□□ 2.46
SNF8-213ENST00000514929 VEZTQ9HBM0 779 aa30.44■■■□□ 2.46
SNF8-213ENST00000514929 PRDM10Q9NQV6 1147 aa30.44■■■□□ 2.46
SNF8-213ENST00000514929 COL1A1P02452 1464 aaPredicted RBP30.44■■■□□ 2.46
SNF8-213ENST00000514929 FAM155AB1AL88 458 aaPredicted RBP30.43■■■□□ 2.46
SNF8-213ENST00000514929 HSPA8P11142 646 aaKnown RBP30.43■■■□□ 2.46
SNF8-213ENST00000514929 MOB2Q70IA6 237 aa30.43■■■□□ 2.46
SNF8-213ENST00000514929 ZIC5Q96T25 663 aa30.42■■■□□ 2.46
SNF8-213ENST00000514929 UBE2Q2LH0YL09 131 aa30.41■■■□□ 2.46
SNF8-213ENST00000514929 SLC10A3P09131 477 aa30.41■■■□□ 2.46
SNF8-213ENST00000514929 CRKP46108 304 aa30.41■■■□□ 2.46
SNF8-213ENST00000514929 GRIK5Q16478 980 aa30.41■■■□□ 2.46
SNF8-213ENST00000514929 DZIP1LQ8IYY4 767 aaKnown RBP30.41■■■□□ 2.46
SNF8-213ENST00000514929 PPP2R3BQ9Y5P8 575 aa30.41■■■□□ 2.46
SNF8-213ENST00000514929 AOX1Q06278 1338 aa30.4■■■□□ 2.46
SNF8-213ENST00000514929 PRKG1Q13976 671 aa30.39■■■□□ 2.46
SNF8-213ENST00000514929 GNL3LQ9NVN8 582 aaKnown RBP30.39■■■□□ 2.46
SNF8-213ENST00000514929 MYH13Q9UKX3 1938 aa30.38■■■□□ 2.45
SNF8-213ENST00000514929 CA12O43570 354 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms