RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.68□□□□□ -1.5
SGCB-203ENST00000514133 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 GBP2P32456 591 aaPredicted RBP5.67□□□□□ -1.5
SGCB-203ENST00000514133 PCBP4P57723 403 aaKnown RBP5.67□□□□□ -1.5
SGCB-203ENST00000514133 GPAT2Q6NUI2 795 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 TRIM56Q9BRZ2 755 aaKnown RBP5.67□□□□□ -1.5
SGCB-203ENST00000514133 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 STRN4Q9NRL3 753 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 KANSL3Q9P2N6 904 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 HCN2Q9UL51 889 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 TRAK1Q9UPV9 953 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 AKAP2Q9Y2D5 859 aa5.67□□□□□ -1.5
SGCB-203ENST00000514133 A0A1W2PP55 124 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 SASH3O75995 380 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 EGFRP00533 1210 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 CYP2E1P05181 493 aaPredicted RBP5.66□□□□□ -1.5
SGCB-203ENST00000514133 SPATA31C1P0DKV0 1188 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 EIF4A3P38919 411 aaKnown RBP5.66□□□□□ -1.5
SGCB-203ENST00000514133 NASPP49321 788 aaPredicted RBP5.66□□□□□ -1.5
SGCB-203ENST00000514133 SFSWAPQ12872 951 aaKnown RBP5.66□□□□□ -1.5
SGCB-203ENST00000514133 PWP1Q13610 501 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 NFE2L2Q16236 605 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 MAP3K11Q16584 847 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 KIAA0319Q5VV43 1072 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 KRT25Q7Z3Z0 450 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 GLIS3Q8NEA6 775 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 MRFAP1L1Q96HT8 127 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 SEC16BQ96JE7 1060 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 ADAMTS1Q9UHI8 967 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 TBX22Q9Y458 520 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 MRVI1Q9Y6F6 885 aa5.66□□□□□ -1.5
SGCB-203ENST00000514133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.66□□□□□ -1.5
SGCB-203ENST00000514133 K7ELQ4 463 aaPredicted RBP5.65□□□□□ -1.5
SGCB-203ENST00000514133 FBXO24O75426 580 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 MAP3K6O95382 1288 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 EDN3P14138 238 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 CCINQ13939 588 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 EGFLAMQ63HQ2 1017 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.5
SGCB-203ENST00000514133 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 C3orf58Q8NDZ4 430 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 TMEM74Q96NL1 305 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 ZNF408Q9H9D4 720 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 EFR3BQ9Y2G0 817 aa5.65□□□□□ -1.5
SGCB-203ENST00000514133 TARSP26639 723 aaKnown RBP5.64□□□□□ -1.51
SGCB-203ENST00000514133 ADH7P40394 386 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 PEAR1Q5VY43 1037 aaPredicted RBP5.64□□□□□ -1.51
SGCB-203ENST00000514133 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 NLGN1Q8N2Q7 840 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 ZNF296Q8WUU4 475 aaPredicted RBP5.64□□□□□ -1.51
SGCB-203ENST00000514133 CPLX3Q8WVH0 158 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 EAF1Q96JC9 268 aaPredicted RBP5.64□□□□□ -1.51
SGCB-203ENST00000514133 PNMA5Q96PV4 448 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 NACC1Q96RE7 527 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 SLC30A3Q99726 388 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 SPOCK3Q9BQ16 436 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 LIN7BQ9HAP6 207 aa5.64□□□□□ -1.51
SGCB-203ENST00000514133 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 CLSTN1O94985 981 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 RLBP1P12271 317 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 COL8A1P27658 744 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 ETFBP38117 255 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 FAM160A1Q05DH4 1040 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 GRIN2CQ14957 1233 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 TCEAL1Q15170 157 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 TPTE2Q6XPS3 522 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 ANKS3Q6ZW76 656 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 TRIM55Q9BYV6 548 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 GSX2Q9BZM3 304 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 GINM1Q9NU53 330 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 TLR6Q9Y2C9 796 aa5.63□□□□□ -1.51
SGCB-203ENST00000514133 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.63□□□□□ -1.51
SGCB-203ENST00000514133 MRPL42Q9Y6G3 142 aaKnown RBP5.63□□□□□ -1.51
SGCB-203ENST00000514133 KRBA1A5PL33 1030 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
SGCB-203ENST00000514133 MMP20O60882 483 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 LILRB5O75023 590 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 PROCP04070 461 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 RARAP10276 462 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 XRCC5P13010 732 aaKnown RBP5.62□□□□□ -1.51
SGCB-203ENST00000514133 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 FBXL19Q6PCT2 694 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 NCAPG2Q86XI2 1143 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 SRPK1Q96SB4 655 aaKnown RBP5.62□□□□□ -1.51
SGCB-203ENST00000514133 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 FRRS1LQ9P0K9 344 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 SALL4Q9UJQ4 1053 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
SGCB-203ENST00000514133 SUPT16HQ9Y5B9 1047 aaKnown RBP5.62□□□□□ -1.51
SGCB-203ENST00000514133 M0R082 166 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 PRPF40BQ6NWY9 871 aaKnown RBP5.61□□□□□ -1.51
SGCB-203ENST00000514133 C20orf204Q6ZNR8 217 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 SV2BQ7L1I2 683 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 MICALL1Q8N3F8 863 aa5.61□□□□□ -1.51
SGCB-203ENST00000514133 OR13H1Q8NG92 308 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms