RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
SH3D19-209ENST00000514013 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
SH3D19-209ENST00000514013 FAM89AQ96GI7 184 aa11.95□□□□□ -0.5
SH3D19-209ENST00000514013 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
SH3D19-209ENST00000514013 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
SH3D19-209ENST00000514013 CAP1Q01518 475 aa11.94□□□□□ -0.5
SH3D19-209ENST00000514013 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
SH3D19-209ENST00000514013 NBPF9Q3BBW0 867 aa11.94□□□□□ -0.5
SH3D19-209ENST00000514013 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
SH3D19-209ENST00000514013 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
SH3D19-209ENST00000514013 MYOZ2Q9NPC6 264 aa11.94□□□□□ -0.5
SH3D19-209ENST00000514013 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
SH3D19-209ENST00000514013 EN2P19622 333 aaPredicted RBP11.93□□□□□ -0.5
SH3D19-209ENST00000514013 PTPN12Q05209 780 aaKnown RBP11.93□□□□□ -0.5
SH3D19-209ENST00000514013 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
SH3D19-209ENST00000514013 OTOP1Q7RTM1 612 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 EYA3Q99504 573 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 MXD3Q9BW11 206 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 TSPYL4Q9UJ04 414 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 FZD1Q9UP38 647 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 TRIM17Q9Y577 477 aa11.93□□□□□ -0.5
SH3D19-209ENST00000514013 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 ATP5J2-PTCD1G3V325 749 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 UFL1O94874 794 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 FOXK1P85037 733 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
SH3D19-209ENST00000514013 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 AGBL3Q8NEM8 1001 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 ISCA1Q9BUE6 129 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
SH3D19-209ENST00000514013 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
SH3D19-209ENST00000514013 RPS8P62241 208 aaKnown RBP11.91□□□□□ -0.5
SH3D19-209ENST00000514013 PRKG1Q13976 671 aa11.91□□□□□ -0.5
SH3D19-209ENST00000514013 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
SH3D19-209ENST00000514013 A0A0C4DFX4 3053 aa11.9□□□□□ -0.5
SH3D19-209ENST00000514013 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
SH3D19-209ENST00000514013 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
SH3D19-209ENST00000514013 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
SH3D19-209ENST00000514013 WNT10BO00744 389 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
SH3D19-209ENST00000514013 TBC1D12O60347 775 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 SASH1O94885 1247 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 ARMC5Q96C12 935 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
SH3D19-209ENST00000514013 INTS3Q68E01 1043 aaKnown RBP11.88□□□□□ -0.51
SH3D19-209ENST00000514013 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
SH3D19-209ENST00000514013 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
SH3D19-209ENST00000514013 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
SH3D19-209ENST00000514013 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
SH3D19-209ENST00000514013 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
SH3D19-209ENST00000514013 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
SH3D19-209ENST00000514013 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
SH3D19-209ENST00000514013 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
SH3D19-209ENST00000514013 DACT2Q5SW24 774 aa11.87□□□□□ -0.51
SH3D19-209ENST00000514013 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
SH3D19-209ENST00000514013 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
SH3D19-209ENST00000514013 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
SH3D19-209ENST00000514013 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
SH3D19-209ENST00000514013 H0YGN5 161 aa11.86□□□□□ -0.51
SH3D19-209ENST00000514013 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
SH3D19-209ENST00000514013 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
SH3D19-209ENST00000514013 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
SH3D19-209ENST00000514013 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
SH3D19-209ENST00000514013 PSME4Q14997 1843 aa11.86□□□□□ -0.51
SH3D19-209ENST00000514013 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 GJA5P36382 358 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 CRHR2Q13324 411 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 DSG2Q14126 1118 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
SH3D19-209ENST00000514013 WNK4Q96J92 1243 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 ZNF333Q96JL9 665 aa11.85□□□□□ -0.51
SH3D19-209ENST00000514013 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
SH3D19-209ENST00000514013 NEFMP07197 916 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 NF2P35240 595 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
SH3D19-209ENST00000514013 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 PODNQ7Z5L7 613 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 TXNRD3Q86VQ6 643 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 PTPN18Q99952 460 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 XDHP47989 1333 aa11.84□□□□□ -0.51
SH3D19-209ENST00000514013 DLL1O00548 723 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
SH3D19-209ENST00000514013 RIPK4P57078 832 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 AOX1Q06278 1338 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
SH3D19-209ENST00000514013 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 COL6A3P12111 3177 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 LAMA3Q16787 3333 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 KLRK1P26718 216 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms