RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 A0A1B0GUL7 405 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 CAMTA2O94983 1202 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 KCNC4Q03721 635 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 TTF1Q15361 905 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 SKOR2Q2VWA4 1001 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 CCDC152Q4G0S7 254 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 FAM89AQ96GI7 184 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 ZSCAN31Q96LW9 406 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 EPAS1Q99814 870 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 ALDH8A1Q9H2A2 487 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 SH2B1Q9NRF2 756 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 TLR7Q9NYK1 1049 aaKnown RBP10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 ATRNO75882 1429 aa10.29□□□□□ -0.76
PPARGC1A-211ENST00000513205 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 ITGA6P23229 1130 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 NECTIN1Q15223 517 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 HLFQ16534 295 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 MEX3CQ5U5Q3 659 aaKnown RBP10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 VPS53Q5VIR6 699 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 USPL1Q5W0Q7 1092 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 LDHAL6AQ6ZMR3 332 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 GJD4Q96KN9 370 aaPredicted RBP10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 ARXQ96QS3 562 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 DBNDD2Q9BQY9 259 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 NYXQ9GZU5 481 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
PPARGC1A-211ENST00000513205 IGSF3O75054 1194 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 HMGB1P09429 215 aaKnown RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 IFIT1P09914 478 aaKnown RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 SSFA2P28290 1259 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 MCM4P33991 863 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 KCNJ4P48050 445 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 NMIQ13287 307 aaPredicted RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 MCMDC2Q4G0Z9 681 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 GORABQ5T7V8 394 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 ACSBG1Q96GR2 724 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 DSCC1Q9BVC3 393 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 ISY1Q9ULR0 285 aaKnown RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 RIPOR2Q9Y4F9 1068 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 SNX14Q9Y5W7 946 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 CYP46A1Q9Y6A2 500 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 UBN2Q6ZU65 1347 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 RIC1Q4ADV7 1423 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 ARAP2Q8WZ64 1704 aa10.27□□□□□ -0.77
PPARGC1A-211ENST00000513205 RPAP1Q9BWH6 1393 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 ITPK1Q13572 414 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 PUM3Q15397 648 aaKnown RBP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 ATP2B3Q16720 1220 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 METTL24Q5JXM2 366 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 TTC39AQ5SRH9 613 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 TMX3Q96JJ7 454 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 CDC5LQ99459 802 aaKnown RBP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 CNNM1Q9NRU3 951 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 TBC1D2BQ9UPU7 963 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 LY75O60449 1722 aa10.26□□□□□ -0.77
PPARGC1A-211ENST00000513205 PDE8BO95263 885 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 NTSR2O95665 410 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 GPTP24298 496 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 IGHMBP2P38935 993 aaKnown RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 LRRC24Q50LG9 513 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 TMED8Q6PL24 325 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 RUFY3Q7L099 469 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 LPIN2Q92539 896 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 JARID2Q92833 1246 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 TTC14Q96N46 770 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 GREM2Q9H772 168 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 PALD1Q9ULE6 856 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 LIMCH1Q9UPQ0 1083 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 BTAF1O14981 1849 aa10.25□□□□□ -0.77
PPARGC1A-211ENST00000513205 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 TAF5LO75529 589 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 RPS6KA4O75676 772 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 CYP2E1P05181 493 aaPredicted RBP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 ZMYM1Q5SVZ6 1142 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 CREB3L3Q68CJ9 461 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 VGLL2Q8N8G2 317 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 MPHOSPH8Q99549 860 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 IL25Q9H293 177 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 NARFQ9UHQ1 456 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 NIP7Q9Y221 180 aaKnown RBP eCLIP10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 COL24A1Q17RW2 1714 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 SLC27A2O14975 620 aa10.24□□□□□ -0.77
PPARGC1A-211ENST00000513205 RNF113AO15541 343 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms